RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 A3GALT2U3KPV4 340 aa9.92□□□□□ -0.82
CLCN6-202ENST00000346436 HPP00738 406 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 TMIGD3P0DMS9 266 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 SSX1Q16384 188 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 OR5M9Q8NGP3 310 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 PATE1Q8WXA2 126 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 ORAI1Q96D31 301 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 SLC35A4Q96G79 324 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 PDCD1LG2Q9BQ51 273 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 PLA2G2FQ9BZM2 168 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 ANKRD19PQ9H560 264 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 DAPP1Q9UN19 280 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 TUBAL3A6NHL2 446 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 SGCEO43556 437 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 CXCL13O43927 109 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 CLEC3BP05452 202 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 HTR1FP30939 366 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 PNLIPRP2P54317 469 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 SRSF5Q13243 272 aaKnown RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 DYRK1AQ13627 763 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 COL28A1Q2UY09 1125 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF322Q6U7Q0 402 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 TMEM64Q6YI46 380 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 SMIM15Q7Z3B0 74 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 FRMD1Q8N878 549 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 SP7Q8TDD2 431 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 LIPHQ8WWY8 451 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF350Q9GZX5 532 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 OR52A5Q9H2C5 316 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 LHX9Q9NQ69 397 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 TAS2R3Q9NYW6 316 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 MLXQ9UH92 298 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 IGHV1OR21-1A0A087WYE8 117 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 APEHP13798 732 aaKnown RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 PTPN6P29350 595 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 MTCP1P56278 107 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 CSRP2Q16527 193 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 TCTN1Q2MV58 587 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 B3GNTL1Q67FW5 361 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 OCSTAMPQ9BR26 566 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 HRASLSQ9HDD0 168 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 INPP5EQ9NRR6 644 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 SLCO1C1Q9NYB5 712 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 OR2J2O76002 312 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 AMY2AP04746 511 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 GRPP07492 148 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 PIPP12273 146 aaPredicted RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 AKR1C4P17516 323 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 GSK3AP49840 483 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 LRRC10Q5BKY1 277 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 OTPQ5XKR4 325 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 FAM26EQ8N5C1 309 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 OR4D6Q8NGJ1 314 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 CMSS1Q9BQ75 279 aaKnown RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 RYDENQ9NUL5 291 aaKnown RBP9.91□□□□□ -0.82
CLCN6-202ENST00000346436 ASB4Q9Y574 426 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 CACNA1CQ13936 2221 aa9.91□□□□□ -0.82
CLCN6-202ENST00000346436 TRDV1A0A1B0GX56 115 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 PPIHO43447 177 aaKnown RBP9.9□□□□□ -0.82
CLCN6-202ENST00000346436 CPEP16870 476 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 MAKP20794 623 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 DDOSTP39656 456 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 C19orf57Q0VDD7 668 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 CDC20Q12834 499 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 MPPED2Q15777 294 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 MFSD12Q6NUT3 480 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 SIMC1Q8NDZ2 872 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 DMBX1Q8NFW5 382 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 OR7G2Q8NG99 324 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 NICN1Q9BSH3 213 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 NOX3Q9HBY0 568 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 OR2S2Q9NQN1 319 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 LILRB5O75023 590 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 IFNA17P01571 189 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 CEACAM5P06731 702 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 SUB1P53999 127 aaKnown RBP eCLIP9.9□□□□□ -0.82
CLCN6-202ENST00000346436 ELP2Q6IA86 826 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 GPR32P1Q8NGA4 272 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF681Q96N22 645 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 TECTBQ96PL2 329 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 SHARPINQ9H0F6 387 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 UBTD1Q9HAC8 227 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 GFOD1Q9NXC2 390 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 TRBV5-3A0A0A0MS03 114 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 A0A1B0GUH1 482 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 TMEM72A0PK05 275 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 CEBPZOSA8MTT3 80 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 OR7C1O76099 320 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-202ENST00000346436 HOXB3P14651 431 aaPredicted RBP9.9□□□□□ -0.82
CLCN6-202ENST00000346436 PLA2G7Q13093 441 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 LTC4SQ16873 150 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 ACER2Q5QJU3 275 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 LINC00299Q6ZSB3 139 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 SLC36A1Q7Z2H8 476 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 SGPP2Q8IWX5 399 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 SLC35F3Q8IY50 421 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 ZNF511Q8NB15 262 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 SNX18Q96RF0 628 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 KCNJ15Q99712 375 aa9.9□□□□□ -0.82
CLCN6-202ENST00000346436 PSD2Q9BQI7 771 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms