RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 APOC1P02654 83 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF93P35789 620 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-201ENST00000345512 NPY4RP50391 375 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 GNMTQ14749 295 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 CORO6Q6QEF8 472 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 ANGPTL5Q86XS5 388 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 FAM160A2Q8N612 972 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-201ENST00000345512 FNDC9Q8TBE3 224 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 KTI12Q96EK9 354 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-201ENST00000345512 CXorf58Q96LI9 332 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 NKX2-4Q9H2Z4 354 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 BIN3Q9NQY0 253 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 MAP1BP46821 2468 aaKnown RBP14.1□□□□□ -0.15
PTPRU-201ENST00000345512 CTDSPLO15194 276 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 EML2O95834 649 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 CBX7O95931 251 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 RGS19P49795 217 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 ACOT7LQ6ZUV0 252 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 RASGRP3Q8IV61 690 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF565Q8N9K5 539 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 PPP1R1CQ8WVI7 109 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 PRRG4Q9BZD6 226 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 PLEKHJ1Q9NW61 149 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 SLC17A2O00624 439 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 EPPINO95925 133 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 SLC2A1P11166 492 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 MGMTP16455 207 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 FJX1Q86VR8 437 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 CCNL2Q96S94 520 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-201ENST00000345512 FKRPQ9H9S5 495 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF160Q9HCG1 818 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 ST6GALNAC2Q9UJ37 374 aa14.1□□□□□ -0.15
PTPRU-201ENST00000345512 UBE2IP63279 158 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 H3F3CQ6NXT2 135 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 NKAIN3Q8N8D7 197 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 TRAF4Q9BUZ4 470 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 C8orf33Q9H7E9 229 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 MMP25Q9NPA2 562 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 NTMQ9P121 344 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 MRPS28Q9Y2Q9 187 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 RBMXL2O75526 392 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 SERPINA2P20848 420 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 PEBP1P30086 187 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 WDR38Q5JTN6 314 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 LSRQ86X29 649 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 OR5L2Q8NGL0 311 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 OR1J2Q8NGS2 313 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 MAFIPQ8WZ33 124 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 RBM24Q9BX46 236 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 TCRBV16S1A1N1A0A5B0 115 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 TMEM127O75204 238 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 MT-ATP6P00846 226 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 BIDP55957 195 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 SNRPNP63162 240 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 SRSF5Q13243 272 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 PHF19Q5T6S3 580 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 TMEM88Q6PEY1 159 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 OR4S1Q8NGB4 309 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 TMED6Q8WW62 240 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 SPACA5Q96QH8 159 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 EMC6Q9BV81 110 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 RPH3AQ9Y2J0 694 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 MRPS17Q9Y2R5 130 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 ZNF646O15015 1829 aaPredicted RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 PRSS37A4D1T9 235 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 SPINT1O43278 529 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 AKR7A3O95154 331 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 NME2P22392 152 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 GABRR1P24046 479 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 EBPQ15125 230 aaKnown RBP14.09□□□□□ -0.15
PTPRU-201ENST00000345512 NPEPL1Q8NDH3 523 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 MRGPRX1Q96LB2 322 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 MOGAT1Q96PD6 335 aa14.09□□□□□ -0.15
PTPRU-201ENST00000345512 ICOSLGO75144 302 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 CFDP00746 253 aaPredicted RBP14.08□□□□□ -0.15
PTPRU-201ENST00000345512 OR8U9P0C7N5 309 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 CCNOP22674 350 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 PPICP45877 212 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 MRPS21P82921 87 aaKnown RBP14.08□□□□□ -0.15
PTPRU-201ENST00000345512 RSU1Q15404 277 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 FAM57BQ71RH2 274 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 HGDQ93099 445 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 PNPLA2Q96AD5 504 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 GAREM1Q9H706 876 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 ZFP64Q9NPA5 681 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 B3GALT1Q9Y5Z6 326 aa14.08□□□□□ -0.15
PTPRU-201ENST00000345512 NSA2O95478 260 aaKnown RBP14.08□□□□□ -0.16
PTPRU-201ENST00000345512 RAB6AP20340 208 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 PSG6Q00889 435 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 SULF2Q8IWU5 870 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 TSLPQ969D9 159 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 HIST1H2AAQ96QV6 131 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 CA10Q9NS85 328 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 C19orf25Q9UFG5 118 aaPredicted RBP14.08□□□□□ -0.16
PTPRU-201ENST00000345512 B9D1Q9UPM9 204 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 PCDHGA9Q9Y5G4 932 aaKnown RBP14.08□□□□□ -0.16
PTPRU-201ENST00000345512 CSAG2Q9Y5P2 127 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 RFPL4AA6NLU0 287 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 RFPL4AL1F8VTS6 287 aa14.08□□□□□ -0.16
PTPRU-201ENST00000345512 TP53I11O14683 189 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms