RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 C19orf43Q9BQ61 176 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 ABHD6Q9BV23 337 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 B4GALT7Q9UBV7 327 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 MCRIP1C9JLW8 97 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 DOK2O60496 412 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 CTRB1P17538 263 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 NKX2-1P43699 371 aaPredicted RBP16.54■□□□□ 0.24
SMC4-201ENST00000344722 HMGA2P52926 109 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 ZP2Q05996 745 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 MORN1Q5T089 497 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 B3GNTL1Q67FW5 361 aaPredicted RBP16.54■□□□□ 0.24
SMC4-201ENST00000344722 ZNF626Q68DY1 528 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 CTRB2Q6GPI1 263 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 LINC00346Q8IVM7 164 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 OR5D18Q8NGL1 313 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 EMG1Q92979 244 aaKnown RBP16.54■□□□□ 0.24
SMC4-201ENST00000344722 NKX2-4Q9H2Z4 354 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 TRBV5-4A0A0C4DH59 114 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 ANKRD30BLA7E2S9 258 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 PEX12O00623 359 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 FGF7P21781 194 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 HOXA1P49639 335 aaPredicted RBP16.54■□□□□ 0.24
SMC4-201ENST00000344722 THBS3P49746 956 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 ZNF542PQ5EBM4 170 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 ADAMTSL4Q6UY14 1074 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 OR5AP2Q8NGF4 316 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 SEH1LQ96EE3 360 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 PLA2G12AQ9BZM1 189 aa16.54■□□□□ 0.24
SMC4-201ENST00000344722 PRSS38A1L453 326 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 PHOX2AO14813 284 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 MT-ATP6P00846 226 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 KITLGP21583 273 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 ITGB8P26012 769 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 VIPR2P41587 438 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 DHPSP49366 369 aaPredicted RBP16.53■□□□□ 0.24
SMC4-201ENST00000344722 FABP9Q0Z7S8 132 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 TEX19Q8NA77 164 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 GCDHQ92947 438 aaPredicted RBP16.53■□□□□ 0.24
SMC4-201ENST00000344722 TVP23CQ96ET8 276 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 ZDHHC5Q9C0B5 715 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 GABRQQ9UN88 632 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 OR7C1O76099 320 aaPredicted RBP16.53■□□□□ 0.24
SMC4-201ENST00000344722 PCBP4P57723 403 aaKnown RBP16.53■□□□□ 0.24
SMC4-201ENST00000344722 DCXRQ7Z4W1 244 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 SCMH1Q96GD3 660 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 CLSTN3Q9BQT9 956 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 SUSD2Q9UGT4 822 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 A4GNTQ9UNA3 340 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 FOXJ3Q9UPW0 622 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 TMEM202A6NGA9 273 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 EXD3Q8N9H8 876 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 CABLES2Q9BTV7 478 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 PADI1Q9ULC6 663 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 LOC107986453A0A1B0GWG9 222 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 CTNSO60931 367 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 ETHE1O95571 254 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 ATF1P18846 271 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 CPEB2Q7Z5Q1 589 aaKnown RBP16.53■□□□□ 0.24
SMC4-201ENST00000344722 CXorf58Q96LI9 332 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 SLC46A2Q9BY10 475 aa16.53■□□□□ 0.24
SMC4-201ENST00000344722 YY2O15391 372 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 PHLDA2Q53GA4 152 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 FAM219BQ5XKK7 198 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 FAM199XQ6PEV8 388 aaPredicted RBP16.52■□□□□ 0.24
SMC4-201ENST00000344722 FAM58AQ8N1B3 248 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 NANOS1Q8WY41 292 aaKnown RBP16.52■□□□□ 0.24
SMC4-201ENST00000344722 PSMF1Q92530 271 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 MR1Q95460 341 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 MSI2Q96DH6 328 aaKnown RBP16.52■□□□□ 0.24
SMC4-201ENST00000344722 RAB9BQ9NP90 201 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 C19orf53Q9UNZ5 99 aaPredicted RBP16.52■□□□□ 0.24
SMC4-201ENST00000344722 EXOGQ9Y2C4 368 aaKnown RBP16.52■□□□□ 0.24
SMC4-201ENST00000344722 TMED7-TICAM2A0A0A6YYA0 188 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 GALR3O60755 368 aaPredicted RBP16.52■□□□□ 0.24
SMC4-201ENST00000344722 METTL15P1P0C7V9 234 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 CYBAP13498 195 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 RPA2P15927 270 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 UBXN2BQ14CS0 331 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 DBX2Q6ZNG2 339 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 PIGCQ92535 297 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 TSLPQ969D9 159 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 TMED7Q9Y3B3 224 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 PLPP2O43688 288 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 PCBD1P61457 104 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 DND1Q8IYX4 353 aaKnown RBP16.52■□□□□ 0.24
SMC4-201ENST00000344722 KIRREL1Q96J84 757 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 PLK3Q9H4B4 646 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 CUTCQ9NTM9 273 aa16.52■□□□□ 0.24
SMC4-201ENST00000344722 OTOL1A6NHN0 477 aaPredicted RBP16.52■□□□□ 0.23
SMC4-201ENST00000344722 SELENOVP59797 346 aa16.52■□□□□ 0.23
SMC4-201ENST00000344722 LRRTM1Q86UE6 522 aa16.52■□□□□ 0.23
SMC4-201ENST00000344722 MS4A6EQ96DS6 147 aa16.52■□□□□ 0.23
SMC4-201ENST00000344722 NXF2Q9GZY0 626 aaKnown RBP16.52■□□□□ 0.23
SMC4-201ENST00000344722 NXT1Q9UKK6 140 aaKnown RBP16.52■□□□□ 0.23
SMC4-201ENST00000344722 ANKRD61A6NGH8 418 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 VSTM5A8MXK1 200 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 UTS2O95399 124 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 PVRP15151 417 aa16.51■□□□□ 0.23
SMC4-201ENST00000344722 RPL27P61353 136 aaKnown RBP16.51■□□□□ 0.23
SMC4-201ENST00000344722 CATR1Q13166 79 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms