RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 GPR160Q9UJ42 338 aa8.55□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF346Q9UL40 294 aaKnown RBP8.55□□□□□ -1.04
TRERF1-201ENST00000340840 SLC22A13Q9Y226 551 aa8.55□□□□□ -1.04
TRERF1-201ENST00000340840 SCN2AQ99250 2005 aa8.55□□□□□ -1.04
TRERF1-201ENST00000340840 ATG2BQ96BY7 2078 aa8.55□□□□□ -1.04
TRERF1-201ENST00000340840 TRAV36DV7A0A075B6V5 113 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 UTS2O95399 124 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 ERCC1P07992 297 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 FGF2P09038 288 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PET100P0DJ07 73 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PLCXD2Q0VAA5 305 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 WDR38Q5JTN6 314 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF660Q6AZW8 331 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 SLC29A4Q7RTT9 530 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 TRAPPC6BQ86SZ2 158 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 C19orf47Q8N9M1 422 aaKnown RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 SHARPINQ9H0F6 387 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 ALX4Q9H161 411 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PRELID3BQ9Y3B1 194 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 A0A0A6YYH2 397 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 TRBV5-5A0A0J9YX44 114 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 A6NJ64 397 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 OR6C65A6NJZ3 312 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 AKR7A3O95154 331 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 SNAPINO95295 136 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 NAGAP17050 411 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 SQSTM1Q13501 440 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 FAM76BQ5HYJ3 339 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 RAB11FIP2Q7L804 512 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 CDC20BQ86Y33 519 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PRSS58Q8IYP2 241 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 FRMD1Q8N878 549 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 AVL9Q8NBF6 648 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 OR1J2Q8NGS2 313 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 OTOSQ8NHW6 89 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 VSTM2LQ96N03 204 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 TPSD1Q9BZJ3 242 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 TINAGL1Q9GZM7 467 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 TAS2R4Q9NYW5 299 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 BPTFQ12830 3046 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 FITM1A5D6W6 292 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 A8MXK9 166 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 OR2T1O43869 369 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 ADRA2CP18825 462 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 CSF2RBP32927 897 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 RABIFP47224 123 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 H2BFSP57053 126 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 ELOCQ15369 112 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 DCAF12L2Q5VW00 463 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 C11orf87Q6NUJ2 197 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 C3orf33Q6P1S2 294 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PRR22Q8IZ63 422 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 NKAIN3Q8N8D7 197 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 SLC37A2Q8TED4 501 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PPP1R1CQ8WVI7 109 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PTDSS2Q9BVG9 487 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 BIN3Q9NQY0 253 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 MTCL1Q9Y4B5 1905 aaKnown RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 SPTA1P02549 2419 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 TMEM269A0A1B0GVZ9 245 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 TMEM235A6NFC5 223 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 ZNF705EA8MWA4 302 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 H3BUI4 141 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 STK17BO94768 372 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 IGF2P01344 180 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 MAOAP21397 527 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 CXCL12P48061 93 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 DHRS2Q13268 280 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 NKAPLQ5M9Q1 402 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 LSRQ86X29 649 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 OR10AC1Q8NH08 325 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 TMEM234Q8WY98 164 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PHYHIPLQ96FC7 376 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 MOGAT1Q96PD6 335 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 GPX7Q96SL4 187 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 ELL3Q9HB65 397 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 CHMP1AQ9HD42 196 aaPredicted RBP8.54□□□□□ -1.04
TRERF1-201ENST00000340840 PILRAQ9UKJ1 303 aa8.54□□□□□ -1.04
TRERF1-201ENST00000340840 DNAH12Q6ZR08 3092 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 NUDT21O43809 227 aaKnown RBP8.53□□□□□ -1.04
TRERF1-201ENST00000340840 ST6GAL1P15907 406 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 HSD17B7P56937 341 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 S100A10P60903 97 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 UBE2IP63279 158 aaKnown RBP8.53□□□□□ -1.04
TRERF1-201ENST00000340840 PMPCAQ10713 525 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 KCNAB1Q14722 419 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 TSC22D1Q15714 1073 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 PLEKHN1Q494U1 663 aaPredicted RBP8.53□□□□□ -1.04
TRERF1-201ENST00000340840 TMEM225Q6GV28 225 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 UQCC3Q6UW78 93 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 UNQ6126/PRO20091Q6UXV3 157 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 STPG2Q8N412 459 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 KCNRGQ8N5I3 272 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 OR5M8Q8NGP6 311 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 RNF141Q8WVD5 230 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 RGP1Q92546 391 aaPredicted RBP8.53□□□□□ -1.04
TRERF1-201ENST00000340840 UTP23Q9BRU9 249 aaKnown RBP8.53□□□□□ -1.04
TRERF1-201ENST00000340840 NMNAT2Q9BZQ4 307 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 RAB22AQ9UL26 194 aa8.53□□□□□ -1.04
TRERF1-201ENST00000340840 EMC9Q9Y3B6 208 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms