RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 DCAF12L2Q5VW00 463 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 LCN10Q6JVE6 187 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 RNF144BQ7Z419 303 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 CLEC4MQ9H2X3 399 aaPredicted RBP13.31□□□□□ -0.28
UBA1-201ENST00000335972 APMAPQ9HDC9 416 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 KLRF1Q9NZS2 232 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 NPIPA1Q9UND3 350 aa13.31□□□□□ -0.28
UBA1-201ENST00000335972 NUP210LQ5VU65 1888 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 A0A1W2PNR3 127 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 NPIPB7O75200 414 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 HEXBP07686 556 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 GIMD1P0DJR0 217 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 ZNF823P16415 610 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 CXCL2P19875 107 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 CSRP1P21291 193 aaKnown RBP13.3□□□□□ -0.28
UBA1-201ENST00000335972 DNASE1L1P49184 302 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 PUDPQ08623 228 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 OR2I1PQ8NGU4 316 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 RNF128Q8TEB7 428 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 RBP7Q96R05 134 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 TNFRSF10AO00220 468 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 ARPC5O15511 151 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 CREBL2O60519 120 aaPredicted RBP13.3□□□□□ -0.28
UBA1-201ENST00000335972 DXOO77932 396 aaKnown RBP13.3□□□□□ -0.28
UBA1-201ENST00000335972 ZNF28P17035 718 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 OR4S1Q8NGB4 309 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 CCDC120Q96HB5 630 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 SORCS2Q96PQ0 1159 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 TINAGL1Q9GZM7 467 aaPredicted RBP13.3□□□□□ -0.28
UBA1-201ENST00000335972 DIABLOQ9NR28 239 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 TMEM269A0A1B0GVZ9 245 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 LOC107986453A0A1B0GWG9 222 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 I3L521 148 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 GOSR2O14653 212 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 NDUFB6O95139 128 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 GNALP38405 381 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 DCAF7P61962 342 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 TLE3Q04726 772 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 GFOD2Q3B7J2 385 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 GUSBP11Q6P575 273 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 ANKRD16Q6P6B7 361 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 RFPL4BQ6ZWI9 263 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 APCDD1LQ8NCL9 501 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 CCNL2Q96S94 520 aaPredicted RBP13.3□□□□□ -0.28
UBA1-201ENST00000335972 SOX7Q9BT81 388 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 SEC61A2Q9H9S3 476 aa13.3□□□□□ -0.28
UBA1-201ENST00000335972 FXYD6-FXYD2A0A087WZ82 144 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 A0A1B0GUH1 482 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 H7C417 338 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 M0R233 179 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 MASP2O00187 686 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 ZNF35P13682 527 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 ANOS1P23352 680 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 CDAP32320 146 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 SLC26A5P58743 744 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 GLO1Q04760 184 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 SLC22A6Q4U2R8 563 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 C4orf46Q504U0 113 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 ZNF248Q8NDW4 579 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 FXYD6Q9H0Q3 95 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 UBE2ZQ9H832 354 aaPredicted RBP13.29□□□□□ -0.28
UBA1-201ENST00000335972 NPDC1Q9NQX5 325 aaPredicted RBP13.29□□□□□ -0.28
UBA1-201ENST00000335972 MTFP1Q9UDX5 166 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 TMEM235A6NFC5 223 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 CCDC85CA6NKD9 419 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 ADAM10O14672 748 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 NUDT21O43809 227 aaKnown RBP13.29□□□□□ -0.28
UBA1-201ENST00000335972 EFNA2O43921 213 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 ALOX12BO75342 701 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 GLB1P16278 677 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 PRSS3P35030 304 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 NUDT1P36639 197 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 BIDP55957 195 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 H2BFSP57053 126 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 SCGB2B2Q4G0G5 96 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 TOR2AQ5JU69 321 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 C11orf88Q6PI97 169 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 MUC20Q8N307 709 aaPredicted RBP13.29□□□□□ -0.28
UBA1-201ENST00000335972 OR52N5Q8NH56 324 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 STK35Q8TDR2 534 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 SLC41A2Q96JW4 573 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 EXO5Q9H790 373 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 FBXO4Q9UKT5 387 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 ETV7Q9Y603 341 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 TGM6O95932 706 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 SFTPDP35247 375 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 MNDAP41218 407 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 CAMK2BQ13554 666 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 RSPO4Q2I0M5 234 aaPredicted RBP13.29□□□□□ -0.28
UBA1-201ENST00000335972 PAPD4Q6PIY7 484 aaKnown RBP13.29□□□□□ -0.28
UBA1-201ENST00000335972 CDH24Q86UP0 819 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 GALNT16Q8N428 558 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 ZNF441Q8N8Z8 693 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 HGDQ93099 445 aa13.29□□□□□ -0.28
UBA1-201ENST00000335972 ZDBF2Q9HCK1 2354 aa13.28□□□□□ -0.28
UBA1-201ENST00000335972 MT-ATP6P00846 226 aa13.28□□□□□ -0.28
UBA1-201ENST00000335972 PRKXP51817 358 aa13.28□□□□□ -0.28
UBA1-201ENST00000335972 FAM209AQ5JX71 171 aa13.28□□□□□ -0.28
UBA1-201ENST00000335972 PRAMEF20Q5VT98 475 aa13.28□□□□□ -0.28
UBA1-201ENST00000335972 OLFML2AQ68BL7 652 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms