RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 FUNDC1Q8IVP5 155 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 MMP21Q8N119 569 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 BATF2Q8N1L9 274 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 GPR173Q9NS66 373 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 DNMT3BQ9UBC3 853 aaKnown RBP9.01□□□□□ -0.97
COL4A6-201ENST00000334504 NSG2Q9Y328 171 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 TMEM183BQ1AE95 376 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 C19orf35Q6ZS72 473 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 OLIG3Q7RTU3 272 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 TMEM25Q86YD3 366 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 CORO2AQ92828 525 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 TEX37Q96LM6 180 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 PLA2G12AQ9BZM1 189 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 FLVCR1Q9Y5Y0 555 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 LOC102723971A0A1B0GUV8 181 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 IAPPP10997 89 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 TBPP20226 339 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 KIR2DL3P43628 341 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 EVX1P49640 407 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF66Q6ZN08 573 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 DCXRQ7Z4W1 244 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 OR2L13Q8N349 312 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 PDLIM5Q96HC4 596 aaKnown RBP9.01□□□□□ -0.97
COL4A6-201ENST00000334504 NMES1Q9C002 83 aa9.01□□□□□ -0.97
COL4A6-201ENST00000334504 F2P00734 622 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 CSF2RAP15509 400 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 TGM1P22735 817 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 MAP2K6P52564 334 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 AQP6Q13520 282 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ACOT6Q3I5F7 207 aaPredicted RBP9□□□□□ -0.97
COL4A6-201ENST00000334504 OR2A2Q6IF42 318 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 OR8D4Q8NGM9 314 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 SCMH1Q96GD3 660 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 UBQLN3Q9H347 655 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF385DQ9H6B1 395 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 PLEKHA2Q9HB19 425 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 PARP4Q9UKK3 1724 aaKnown RBP9□□□□□ -0.97
COL4A6-201ENST00000334504 SPEF2Q9C093 1822 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 A0A1B0GWA3 101 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 XKRY2A2RUG3 117 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 SERINC4A6NH21 518 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 BMPR1BO00238 502 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 GPR75O95800 540 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 HBQ1P09105 142 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 BMPR1AP36894 532 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 RUNX2Q13950 521 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 KIR2DS3Q14952 304 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 Q6ZSR9 355 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF485Q8NCK3 441 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 OR10J5Q8NHC4 309 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 TMEM37Q8WXS4 190 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 OR5V1Q9UGF6 321 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 TRAV36DV7A0A075B6V5 113 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 SMAD6O43541 496 aaKnown RBP9□□□□□ -0.97
COL4A6-201ENST00000334504 PRKRAO75569 313 aaKnown RBP9□□□□□ -0.97
COL4A6-201ENST00000334504 GLSO94925 669 aaPredicted RBP9□□□□□ -0.97
COL4A6-201ENST00000334504 SLC25A6P12236 298 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ADRA1AP35348 466 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 SOX18P35713 384 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 HIST1H3AP68431 136 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 DSC1Q08554 894 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 GUK1Q16774 197 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ABHD17BQ5VST6 288 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 PPP1R3BQ86XI6 285 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 TMEFF1Q8IYR6 380 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 DUS3LQ96G46 650 aaKnown RBP9□□□□□ -0.97
COL4A6-201ENST00000334504 FAM117AQ9C073 453 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 POMT2Q9UKY4 750 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 LMO7Q8WWI1 1683 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ZNF207O43670 478 aaKnown RBP9□□□□□ -0.97
COL4A6-201ENST00000334504 CST2P09228 141 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ABOP16442 354 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 P2RY2P41231 377 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 PPP1CBP62140 327 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 GABREP78334 506 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 FABP5Q01469 135 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 IHHQ14623 411 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 C2orf50Q96LR7 162 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 APOOQ9BUR5 198 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ENTPD2Q9Y5L3 495 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 CCDC187A0A096LP49 1063 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 DBX1A6NMT0 343 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 HEPACAM2A8MVW5 462 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 M0R143 59 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 OR2J3O76001 311 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 LY86O95711 162 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 CHRM2P08172 466 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 PI3P19957 117 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 RABIFP47224 123 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 JAG1P78504 1218 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ANKRD34AQ69YU3 496 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 DHRS4L2Q6PKH6 230 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 WDR88Q6ZMY6 472 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 LYG2Q86SG7 212 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 OR2G2Q8NGZ5 317 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 PPP1R1CQ8WVI7 109 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 ZFPM2Q8WW38 1151 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 SLCO4A1Q96BD0 722 aa9□□□□□ -0.97
COL4A6-201ENST00000334504 NDRG4Q9ULP0 352 aaKnown RBP9□□□□□ -0.97
COL4A6-201ENST00000334504 PPP1R3CQ9UQK1 317 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms