RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ADRA1AP35348 466 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 OR1D4P47884 311 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 SMAGPQ0VAQ4 97 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 FAHD1Q6P587 224 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 IRF7Q92985 503 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 MARVELD3Q96A59 401 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 NXT1Q9UKK6 140 aaKnown RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 BAZ2BQ9UIF8 2168 aaKnown RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 TRAV27A0A087WT01 109 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 MEIKINA0A087WXM9 373 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 A0A1W2PPQ1 181 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 IFITM5A6NNB3 132 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 CTDSPLO15194 276 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 AREGP15514 252 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 OMGP23515 440 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 APEX1P27695 318 aaKnown RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 BIDP55957 195 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 POU3F1Q03052 451 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 TMEM64Q6YI46 380 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 OVCH2Q7RTZ1 564 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 ZNF583Q96ND8 569 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 NMES1Q9C002 83 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 MARCH4Q9P2E8 410 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 FEZF1A0PJY2 475 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 F5H5K5 113 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 LEFTY2O00292 366 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 HSBP1O75506 76 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 POU3F2P20265 443 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 GLYATL3Q5SZD4 288 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 MRPL2Q5T653 305 aaKnown RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 YOD1Q5VVQ6 348 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 ESPNLQ6ZVH7 1005 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 LILRA2Q8N149 483 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 IL22RA1Q8N6P7 574 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 OR2M7Q8NG81 312 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 SLC38A5Q8WUX1 472 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 FAM71F1Q96KD3 344 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 RNF208Q9H0X6 261 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 COCHO43405 550 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 SORBS2O94875 1100 aaKnown RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 VAMP5O95183 116 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 OR10P1Q8NGE3 313 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 DIO2Q92813 273 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 ATOH8Q96SQ7 321 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 RTL8AQ9BWD3 113 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 RARRES3Q9UL19 164 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 A8MUA0 341 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 ZNF593O00488 134 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 SCGB1C2P0DMR2 95 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 BTF3P20290 206 aaKnown RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 PCSK6P29122 969 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 G6PCP35575 357 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 GNG4P50150 75 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 GABREP78334 506 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 TAZQ16635 292 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 COL5A1-AS1Q5SY13 56 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 ACOT4Q8N9L9 421 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 SLC26A10Q8NG04 563 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 OIT3Q8WWZ8 545 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 NEIL1Q96FI4 390 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 REEP6Q96HR9 211 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 TMEM191AQ9H0A3 160 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 KCNK12Q9HB15 430 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 TMEM9BQ9NQ34 198 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 POLDIP2Q9Y2S7 368 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 CFAP20Q9Y6A4 193 aaKnown RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 DRGXA6NNA5 263 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 ZAR1LA6NP61 321 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 SUSD5O60279 629 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 PSMB10P40306 273 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 C9orf131Q5VYM1 1079 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 TBPL2Q6SJ96 375 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 ZFP62Q8NB50 900 aaPredicted RBP5.08□□□□□ -1.6
PTPRB-202ENST00000334414 EGLN2Q96KS0 407 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 ATP5SQ99766 215 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 NAT8Q9UHE5 227 aa5.08□□□□□ -1.6
PTPRB-202ENST00000334414 CD68P34810 354 aaPredicted RBP5.07□□□□□ -1.6
PTPRB-202ENST00000334414 ADPRHP54922 357 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 RPL24P83731 157 aaKnown RBP5.07□□□□□ -1.6
PTPRB-202ENST00000334414 OR7A5Q15622 319 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 WRAP73Q9P2S5 460 aaPredicted RBP5.07□□□□□ -1.6
PTPRB-202ENST00000334414 ARAP2Q8WZ64 1704 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 KCPQ6ZWJ8 1503 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 LINC00862A6NCI5 91 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 SEMA7AO75326 666 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 HAND1O96004 215 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 HOXB2P14652 356 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 RPS23P62266 143 aaKnown RBP5.07□□□□□ -1.6
PTPRB-202ENST00000334414 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 MAMDC4Q6UXC1 1216 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 GJC3Q8NFK1 279 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 GMPPAQ96IJ6 420 aaPredicted RBP5.07□□□□□ -1.6
PTPRB-202ENST00000334414 FGF20Q9NP95 211 aaPredicted RBP5.07□□□□□ -1.6
PTPRB-202ENST00000334414 ALKBH4Q9NXW9 302 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 TMED3Q9Y3Q3 217 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 CRYBG1Q9Y4K1 1723 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 SSSCA1O60232 199 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 CD14P08571 375 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 ARFGAP1Q8N6T3 406 aa5.07□□□□□ -1.6
PTPRB-202ENST00000334414 FAM210BQ96KR6 192 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms