RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 FOXB1Q99853 325 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 LINC00470Q9BZP3 86 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 ADGRL4Q9HBW9 690 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 JKAMPQ9P055 326 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 FKBP7Q9Y680 259 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 LRRK2Q5S007 2527 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 HLA-DQA2P01906 255 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 CD8BP10966 210 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 DBTP11182 482 aaKnown RBP14.47□□□□□ -0.09
SHOX-201ENST00000334060 JUNBP17275 347 aaPredicted RBP14.47□□□□□ -0.09
SHOX-201ENST00000334060 CDH15P55291 814 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 ENDOGQ14249 297 aaKnown RBP14.47□□□□□ -0.09
SHOX-201ENST00000334060 OCLNQ16625 522 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 C6orf141Q5SZD1 244 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 ALKBH2Q6NS38 261 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 SPATC1Q76KD6 591 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 SKA3Q8IX90 412 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 DEPDC4Q8N2C3 294 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 ZNF786Q8N393 782 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 ZNF433Q8N7K0 673 aaPredicted RBP14.47□□□□□ -0.09
SHOX-201ENST00000334060 S100ZQ8WXG8 99 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 TMIGD2Q96BF3 282 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 LGALS12Q96DT0 336 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 FBXO17Q96EF6 278 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 BCL7BQ9BQE9 202 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 C1QTNF6Q9BXI9 259 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 WDR12Q9GZL7 423 aaKnown RBP14.47□□□□□ -0.09
SHOX-201ENST00000334060 RACGAP1Q9H0H5 632 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 TMEM38BQ9NVV0 291 aa14.47□□□□□ -0.09
SHOX-201ENST00000334060 ZNF629Q9UEG4 869 aaPredicted RBP14.47□□□□□ -0.09
SHOX-201ENST00000334060 GCN1Q92616 2671 aaKnown RBP14.47□□□□□ -0.09
SHOX-201ENST00000334060 ZNF587BE7ETH6 402 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 H3BMQ9 156 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 SLC1A7O00341 560 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 AKAP8O43823 692 aaKnown RBP14.46□□□□□ -0.09
SHOX-201ENST00000334060 PLA2G2AP14555 144 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 IL18R1Q13478 541 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 ZNF846Q147U1 533 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 TRIM16LQ309B1 348 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 MRGPRGQ86SM5 289 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 TIGD4Q8IY51 512 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 OR2T4Q8NH00 348 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 RAB2BQ8WUD1 216 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 GGHQ92820 318 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 RNFT2Q96EX2 444 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 COG8Q96MW5 612 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 ZNF416Q9BWM5 594 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 MROQ9BYG7 248 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 MOV10Q9HCE1 1003 aaKnown RBP14.46□□□□□ -0.09
SHOX-201ENST00000334060 POLE4Q9NR33 117 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 KCNG2Q9UJ96 466 aa14.46□□□□□ -0.09
SHOX-201ENST00000334060 C19orf84I3L1E1 186 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 PRODHO43272 600 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 KHDRBS3O75525 346 aaKnown RBP14.45□□□□□ -0.1
SHOX-201ENST00000334060 GLCEO94923 617 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 AGFG2O95081 481 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 HLA-HP01893 362 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 CRHP06850 196 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 HTR1AP08908 422 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 OPRM1P35372 400 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 EIF2B2P49770 351 aaKnown RBP14.45□□□□□ -0.1
SHOX-201ENST00000334060 ZNF813Q6ZN06 617 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 POMGNT2Q8NAT1 580 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 ZFP3Q96NJ6 502 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 SNX18Q96RF0 628 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 LHFPL6Q9Y693 200 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 SPTAN1Q13813 2472 aaKnown RBP14.45□□□□□ -0.1
SHOX-201ENST00000334060 ZNF99A8MXY4 864 aaPredicted RBP14.45□□□□□ -0.1
SHOX-201ENST00000334060 PTGES3LE9PB15 166 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 RPL36A-HNRNPH2H7BZ11 118 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 COX5AP20674 150 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 PAICSP22234 425 aaKnown RBP14.45□□□□□ -0.1
SHOX-201ENST00000334060 C21orf33P30042 268 aaPredicted RBP14.45□□□□□ -0.1
SHOX-201ENST00000334060 HTR1FP30939 366 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 TMEM211Q6ICI0 200 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 CFAP77Q6ZQR2 320 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 PLEKHG7Q6ZR37 379 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 AHSA2Q719I0 299 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 DPY19L4Q7Z388 723 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 GLB1L2Q8IW92 636 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 SETD9Q8NE22 299 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 OR10S1Q8NGN2 331 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 OR1K1Q8NGR3 316 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 OR6N2Q8NGY6 317 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 HMG20AQ9NP66 347 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 CLN6Q9NWW5 311 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 DOPEY1Q5JWR5 2465 aa14.45□□□□□ -0.1
SHOX-201ENST00000334060 DCHS2Q6V1P9 2916 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 DVL2O14641 736 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 RER1O15258 196 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 GSTT2P0CG29 244 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 GSTT2BP0CG30 244 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 MPGP29372 298 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 SLC15A1P46059 708 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 TEKQ02763 1124 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 OXA1LQ15070 435 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 STK11Q15831 433 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 GABRA6Q16445 453 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 SLC25A30Q5SVS4 291 aa14.44□□□□□ -0.1
SHOX-201ENST00000334060 FOXL2NBQ6ZUU3 175 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms