RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 EIF1AYO14602 144 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 XRCC3O43542 346 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 PEX14O75381 377 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 SRSF10O75494 262 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 CTAG2O75638 210 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 KDM4BO94953 1096 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 ANXA3P12429 323 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 MRPS10P82664 201 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 MRPL14Q6P1L8 145 aaKnown RBP13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 DNM1P34Q6PK57 102 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 UBALD2Q8IYN6 164 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 NAT6Q93015 286 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 FAM3DQ96BQ1 224 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 HYLS1Q96M11 299 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 TRAF4Q9BUZ4 470 aaPredicted RBP13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 DEFB126Q9BYW3 111 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 ACTR6Q9GZN1 396 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 EMC7Q9NPA0 242 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 ZFP64Q9NPA5 681 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 ALKBH4Q9NXW9 302 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 B3GAT1Q9P2W7 334 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 R4GMQ9 66 aa13.29□□□□□ -0.28
CLCNKA-201ENST00000331433 ETV2O00321 342 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 ARPC1BO15143 372 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 ALDOBP05062 364 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 CELA2AP08217 269 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 MNDAP41218 407 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 EIF1AXP47813 144 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 DLX5P56178 289 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 RAB11BQ15907 218 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 C2orf76Q3KRA6 126 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 LINC00303Q3SY05 128 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 ANKRD16Q6P6B7 361 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 C9orf62Q8N4C0 152 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 OR51A2Q8NGJ7 313 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 EDAQ92838 391 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 MRGPRX4Q96LA9 322 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 CENPMQ9NSP4 180 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 C19orf25Q9UFG5 118 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 LOC107986453A0A1B0GWG9 222 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 A0A1W2PNR3 127 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 GGT3PA6NGU5 568 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 SLC17A2O00624 439 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 LMX1BO60663 402 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 LDOC1O95751 146 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 ONECUT2O95948 504 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 FCER2P06734 321 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 MAP2K6P52564 334 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 PRAMEF20Q5VT98 475 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 OR11H4Q8NGC9 324 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 OR1J4Q8NGS1 313 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 THRSPQ92748 146 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 SPACA9Q96E40 222 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 SLC25A44Q96H78 314 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 CMKLR1Q99788 373 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 POTEKPQ9BYX7 375 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 SLC26A1Q9H2B4 701 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 G6PC2Q9NQR9 355 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 CGGBP1Q9UFW8 167 aaPredicted RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 CDV3Q9UKY7 258 aaKnown RBP13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 B3GALT5Q9Y2C3 310 aa13.28□□□□□ -0.28
CLCNKA-201ENST00000331433 FREM2Q5SZK8 3169 aa13.27□□□□□ -0.28
CLCNKA-201ENST00000331433 SDK2Q58EX2 2172 aa13.27□□□□□ -0.28
CLCNKA-201ENST00000331433 A0A1W2PPC1 479 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 NAP1L6A6NFF2 107 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 CD2P06729 351 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 GUCA2AQ02747 115 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 ELFN2Q5R3F8 820 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 OLFML2AQ68BL7 652 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 Q6ZTK2 550 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 SLC22A8Q8TCC7 542 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 GAL3ST1Q99999 423 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 CKLFQ9UBR5 152 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 OR52A1Q9UKL2 312 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 ING4Q9UNL4 249 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 PHF3Q92576 2039 aaKnown RBP13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 TRAV18A0A075B6X5 111 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 CCDC163A0A0D9SF12 145 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 TMEM269A0A1B0GVZ9 245 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 MEIS3P1A6NDR6 274 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 SULT1A3P0DMM9 295 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 SULT1A4P0DMN0 295 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 MSX1P28360 303 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 SCAND1P57086 179 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 ZP1P60852 638 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 PCK2Q16822 640 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 FAM166AQ6J272 317 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 SLC25A25Q6KCM7 469 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 FGD2Q7Z6J4 655 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 GPAT4Q86UL3 456 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 OR13C3Q8NGS6 347 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 GRPEL2Q8TAA5 225 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 C11orf40Q8WZ69 217 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 NOX3Q9HBY0 568 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 ZNF275Q9NSD4 429 aaPredicted RBP13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 MGAT4AQ9UM21 535 aa13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 RPH3AQ9Y2J0 694 aaPredicted RBP13.27□□□□□ -0.29
CLCNKA-201ENST00000331433 LOC100289279A0A1B0GTE1 492 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 TMEM272A0A1B0GTI8 110 aa13.26□□□□□ -0.29
CLCNKA-201ENST00000331433 TEX51A0A1B0GUA7 166 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms