RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 KLHL9Q9P2J3 617 aa14.55□□□□□ -0.08
PDLIM1-201ENST00000329399 HRNRQ86YZ3 2850 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 A0A1W2PQL4 384 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 EIF1AYO14602 144 aaKnown RBP14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 SULT1C4O75897 302 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 AQP8O94778 261 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 APOL3O95236 402 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 IL2RAP01589 272 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 HRGP04196 525 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 IFNGR1P15260 489 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 FGF9P31371 208 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 SFTPDP35247 375 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 GBX2P52951 348 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 POU3F1Q03052 451 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 ZNF85Q03923 595 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 EGR3Q06889 387 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 CD200R1LQ6Q8B3 271 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 TIGD4Q8IY51 512 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 MS4A15Q8N5U1 240 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 SNX33Q8WV41 574 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 WNT2BQ93097 391 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 SLC25A44Q96H78 314 aaPredicted RBP14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 INTS14Q96SY0 518 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 NUAK2Q9H093 628 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 SYT4Q9H2B2 425 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 WDR76Q9H967 626 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 KLHL13Q9P2N7 655 aa14.54□□□□□ -0.08
PDLIM1-201ENST00000329399 AKAP6Q13023 2319 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 TRDV1A0A1B0GX56 115 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 TNFSF11O14788 317 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 PLPP2O43688 288 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 KHDRBS3O75525 346 aaKnown RBP14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 SERPINI2O75830 405 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 IGHG1P01857 330 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 IGFBP2P18065 325 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 SPCS2Q15005 226 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 TEX30Q5JUR7 227 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 LIPKQ5VXJ0 399 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 VASH1Q7L8A9 365 aaPredicted RBP14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 MEIOBQ8N635 442 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 OR10D3Q8NH80 312 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 DYNC2LI1Q8TCX1 351 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 MARVELD3Q96A59 401 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 KCNN2Q9H2S1 579 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 CCDC59Q9P031 241 aaKnown RBP14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 B3GAT1Q9P2W7 334 aa14.53□□□□□ -0.08
PDLIM1-201ENST00000329399 IGLV1-36A0A0B4J1U3 117 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 A0A1W2PNR3 127 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 ZNF726A6NNF4 738 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 CXCL13O43927 109 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 SLC16A7O60669 478 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 TMCC2O75069 709 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 TNFSF13O75888 250 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 CLPXO76031 633 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 PLGP00747 810 aaPredicted RBP14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 TMIGD3P0DMS9 266 aaPredicted RBP14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 KLK2P20151 261 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 CTSSP25774 331 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 SOX6P35712 828 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 CRYBB2P43320 205 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 EIF1AXP47813 144 aaKnown RBP14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 TGM4P49221 684 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 CARD18P57730 90 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 VBP1P61758 197 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 DYNC1I2Q13409 638 aaKnown RBP14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 AQP6Q13520 282 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 RPL22L1Q6P5R6 122 aaKnown RBP14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 PAMR1Q6UXH9 720 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 CDC20BQ86Y33 519 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 CPNE4Q96A23 557 aaPredicted RBP14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 CHCHD6Q9BRQ6 235 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 DCUN1D5Q9BTE7 237 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 MRPL13Q9BYD1 178 aaKnown RBP14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 DCSTAMPQ9H295 470 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 KCNG2Q9UJ96 466 aa14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 SF3B6Q9Y3B4 125 aaKnown RBP14.52□□□□□ -0.08
PDLIM1-201ENST00000329399 ABCA4P78363 2273 aa14.52□□□□□ -0.09
PDLIM1-201ENST00000329399 AKAP9Q99996 3911 aa14.52□□□□□ -0.09
PDLIM1-201ENST00000329399 SLC22A20A6NK97 555 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 OGG1O15527 345 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 TRAF3IP2O43734 574 aaPredicted RBP14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 SERPINA3P01011 423 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 TFP02787 698 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 MRPL3P09001 348 aaKnown RBP14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF182P17025 639 aaPredicted RBP14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 PYCR1P32322 319 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 B3GLCTQ6Y288 498 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 FAM220AQ7Z4H9 259 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 KLBQ86Z14 1044 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 OR2V1Q8NHB1 315 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 PHYHIPQ92561 330 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 DNAJA3Q96EY1 480 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 MED18Q9BUE0 208 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 SRXN1Q9BYN0 137 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 OR51E2Q9H255 320 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 MMP27Q9H306 513 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 ZNF629Q9UEG4 869 aaPredicted RBP14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 LAMP5Q9UJQ1 280 aa14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 MAP1AP78559 2803 aaPredicted RBP14.51□□□□□ -0.09
PDLIM1-201ENST00000329399 LOC100506127A0A0U1RQW1 187 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms