RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 ENDOGQ14249 297 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 C1orf94Q6P1W5 598 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 LRP11Q86VZ4 500 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 LINC00471Q8N535 108 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 C11orf40Q8WZ69 217 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 POM121L2Q96KW2 1035 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 WNT5BQ9H1J7 359 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 EIF3KQ9UBQ5 218 aaKnown RBP23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 LYVE1Q9Y5Y7 322 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 ZANQ9Y493 2812 aa23.73■■□□□ 1.39
ATPAF1-201ENST00000329231 CR1P17927 2039 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 A0A1W2PPW3 197 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 TNFRSF11BO00300 401 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 IMPA2O14732 288 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 SLC16A7O60669 478 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 IGFBP1P08833 259 aaPredicted RBP23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 DAOP14920 347 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 USF1P22415 310 aaPredicted RBP23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 GSSP48637 474 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 TSPAN31Q12999 210 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 FAM98BQ52LJ0 330 aaKnown RBP23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 UNQ6126/PRO20091Q6UXV3 157 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 ZNF540Q8NDQ6 660 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 ERMAPQ96PL5 475 aaPredicted RBP23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 RERGLQ9H628 205 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 EMC7Q9NPA0 242 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 GPR160Q9UJ42 338 aa23.72■■□□□ 1.39
ATPAF1-201ENST00000329231 NSD1Q96L73 2696 aaPredicted RBP23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 C5orf49A4QMS7 147 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 AQP12BA6NM10 295 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 VWC2LB2RUY7 222 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 GSC2O15499 205 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 CD5LO43866 347 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 PPP1R3DO95685 299 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 SCG5P05408 212 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 ZNF250P15622 560 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 ALDH3B1P43353 468 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 KLF3P57682 345 aaPredicted RBP23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 PGBD2Q6P3X8 592 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 PTCHD4Q6ZW05 846 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 GLB1L2Q8IW92 636 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 AQP12AQ8IXF9 295 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 ICA1LQ8NDH6 482 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 SYNPRQ8TBG9 265 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 FOXN4Q96NZ1 517 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 IFT27Q9BW83 186 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 CADM1Q9BY67 442 aaKnown RBP23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 TPK1Q9H3S4 243 aa23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 MYEF2Q9P2K5 600 aaKnown RBP23.71■■□□□ 1.39
ATPAF1-201ENST00000329231 FN1P02751 2386 aaKnown RBP23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 LOC100509620A0A075B734 347 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 INAFM1C9JVW0 142 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 ARPC3O15145 178 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 TLX2O43763 284 aaPredicted RBP23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 CDKN2AP42771 156 aaKnown RBP23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 NR4A2P43354 598 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 ERVS71-1P61550 626 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 SCRN3Q0VDG4 424 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 TMEM249Q2WGJ8 235 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 KRTAP21-3Q3LHN1 58 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 ZNF774Q6NX45 483 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 UGT2A3Q6UWM9 527 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 OR1J1Q8NGS3 322 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 NUAK2Q9H093 628 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 SLCO1C1Q9NYB5 712 aa23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 COA3Q9Y2R0 106 aaPredicted RBP23.7■■□□□ 1.38
ATPAF1-201ENST00000329231 CRABP1P29762 137 aa23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 MAD2L1BPQ15013 274 aaPredicted RBP23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 NKPD1Q17RQ9 610 aa23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 DNM1P34Q6PK57 102 aa23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 JAZF1Q86VZ6 243 aa23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 C1orf174Q8IYL3 243 aa23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 UBASH3BQ8TF42 649 aa23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 SAMD8Q96LT4 415 aa23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 TAAR3PQ9P1P4 343 aa23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 NDRG4Q9ULP0 352 aaKnown RBP23.69■■□□□ 1.38
ATPAF1-201ENST00000329231 ABCA1O95477 2261 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 IGLV3-9A0A075B6K5 115 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 IDH3BO43837 385 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 CLPTM1O96005 669 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 NOS3P29474 1203 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 LSM6P62312 80 aaKnown RBP23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 FLOT2Q14254 428 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 GGTLC2Q14390 218 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 MOGQ16653 247 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 ZNF620Q6ZNG0 422 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 ZNF786Q8N393 782 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 OR4C15Q8NGM1 316 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 SNX18Q96RF0 628 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 POMPQ9Y244 141 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 RTTNQ86VV8 2226 aa23.68■■□□□ 1.38
ATPAF1-201ENST00000329231 CCNB2O95067 398 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 RENP00797 406 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 RAP2AP10114 183 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 COX5BP10606 129 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 GIFP27352 417 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 WNT5AP41221 380 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 AQP6Q13520 282 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 RPL13AP3Q6NVV1 102 aa23.67■■□□□ 1.38
ATPAF1-201ENST00000329231 LEG1Q6P5S2 330 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms