RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 RAD52P43351 418 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 TCTN1Q2MV58 587 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 PRSS35Q8N3Z0 413 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 SLC25A46Q96AG3 418 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 TCEAL2Q9H3H9 227 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 PLAC1Q9HBJ0 212 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 KCNIP2Q9NS61 270 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 GPATCH2Q9NW75 528 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 TMEM82A0PJX8 343 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 C2orf72A6NCS6 295 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 ARPC3O15145 178 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 DHHO43323 396 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 UBE2IP63279 158 aaKnown RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 DBPQ10586 325 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 SHBQ15464 509 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF585AQ6P3V2 769 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 LINC00346Q8IVM7 164 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 NOXO1Q8NFA2 376 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 BARHL1Q9BZE3 327 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 WDR54Q9H977 334 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 GLRX2Q9NS18 164 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 OR8U9P0C7N5 309 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 WNT3P56703 355 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 CAMK2BQ13554 666 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 GLYR1Q49A26 553 aaPredicted RBP10.38□□□□□ -0.75
COL4A5-201ENST00000328300 C12orf73Q69YU5 71 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 OR52N5Q8NH56 324 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 GLYATL2Q8WU03 294 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 ZCCHC4Q9H5U6 513 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 SLC22A11Q9NSA0 550 aa10.38□□□□□ -0.75
COL4A5-201ENST00000328300 A0A0D9SG52 128 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 SLC22A20A6NK97 555 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 NXPH2O95156 264 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 CHRNB1P11230 501 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 VEGFCP49767 419 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 EMDP50402 254 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF793Q6ZN11 406 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 RFPL4BQ6ZWI9 263 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 C1orf87Q8N0U7 546 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 DCUN1D4Q92564 292 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 OR5M11Q96RB7 305 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 SULT1C2O00338 296 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 SHC1P29353 583 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 BLVRBP30043 206 aaPredicted RBP10.37□□□□□ -0.75
COL4A5-201ENST00000328300 GDNFP39905 211 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 PLXDC2Q6UX71 529 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 FGGYQ96C11 551 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 KIRREL1Q96J84 757 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 RCE1Q9Y256 329 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 LOC107986453A0A1B0GWG9 222 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 CTSVO60911 334 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 TRAPPC2P0DI81 140 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 TRAPPC2BP0DI82 140 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 CLDN15P56746 228 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 RPS27AP62979 156 aaKnown RBP10.37□□□□□ -0.75
COL4A5-201ENST00000328300 UBA52P62987 128 aaKnown RBP10.37□□□□□ -0.75
COL4A5-201ENST00000328300 CTU2Q2VPK5 515 aaKnown RBP10.37□□□□□ -0.75
COL4A5-201ENST00000328300 PRTGQ2VWP7 1150 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 LIPNQ5VXI9 398 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 VN1R4Q7Z5H5 301 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF573Q86YE8 665 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ELMOD3Q96FG2 381 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF419Q96HQ0 510 aaPredicted RBP10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF845Q96IR2 970 aaPredicted RBP10.37□□□□□ -0.75
COL4A5-201ENST00000328300 FCRL1Q96LA6 429 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ABHD6Q9BV23 337 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 RAB33BQ9H082 229 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 IKZF5Q9H5V7 419 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 BIN3Q9NQY0 253 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 TMEM200CA6NKL6 621 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 HMGA2P52926 109 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 BTG1P62324 171 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 TPBGQ13641 420 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF74Q16587 644 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 COMTD1Q86VU5 262 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ARL11Q969Q4 196 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 C8orf44Q96CB5 159 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 SELENOIQ9C0D9 397 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 GLAP06280 429 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 LUMP51884 338 aaPredicted RBP10.37□□□□□ -0.75
COL4A5-201ENST00000328300 FOXF1Q12946 379 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ADPRMQ3LIE5 342 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 SMIM19Q96E16 107 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 ATF6BQ99941 703 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 OSGIN1Q9UJX0 560 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 B3GALT1Q9Y5Z6 326 aa10.37□□□□□ -0.75
COL4A5-201ENST00000328300 MEIOCA2RUB1 952 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 PMS2P2O95744 297 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CBX7O95931 251 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ARL3P36405 182 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 GABRA2P47869 451 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CCR9P51686 369 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CLN3Q13286 438 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 MRM1Q6IN84 353 aaKnown RBP10.36□□□□□ -0.75
COL4A5-201ENST00000328300 DEGS2Q6QHC5 323 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 SSX8Q7RTT4 187 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 CNTNAP3BQ96NU0 1288 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 P4HTMQ9NXG6 502 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 ZNF225Q9UK10 706 aa10.36□□□□□ -0.75
COL4A5-201ENST00000328300 KIAA1217Q5T5P2 1943 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms