RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CGAP01215 116 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CD8BP10966 210 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 B4GALT1P15291 398 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CTSSP25774 331 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 MPGP29372 298 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CD79BP40259 229 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 CA7P43166 264 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ARF1P84077 181 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 EIF2B1Q14232 305 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ENDOGQ14249 297 aaKnown RBP9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 OR2G6Q5TZ20 316 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 FAM27BQ5VT28 67 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 Q6ZT83 130 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 SYS1Q8N2H4 156 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 HTRA1Q92743 480 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 OR5M11Q96RB7 305 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 DMRTA2Q96SC8 542 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 VKORC1Q9BQB6 163 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF416Q9BWM5 594 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 SH3BGRL2Q9UJC5 107 aa9.01□□□□□ -0.97
VIPAS39-201ENST00000327028 HSPB2A8KAH6 182 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 PRR32B1ATL7 298 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 SEC14L2O76054 403 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 INMTO95050 263 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 IL18BPO95998 194 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 MT-ND5P03915 603 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 CST2P09228 141 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 CAPZA2P47755 286 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 GP2P55259 537 aaKnown RBP9□□□□□ -0.97
VIPAS39-201ENST00000327028 EGR3Q06889 387 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 PMPCAQ10713 525 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 SPHARQ15513 63 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 HSPB2Q16082 182 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF684Q5T5D7 378 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 SYT6Q5T7P8 510 aaPredicted RBP9□□□□□ -0.97
VIPAS39-201ENST00000327028 ZNF813Q6ZN06 617 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 EGFL6Q8IUX8 553 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 LINC00346Q8IVM7 164 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 SLC22A24Q8N4F4 322 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 OR52N5Q8NH56 324 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 ST7LQ8TDW4 575 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 SNX33Q8WV41 574 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 ABHD6Q9BV23 337 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 CDADC1Q9BWV3 514 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 TTTY10Q9BZA0 68 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 POLEQ07864 2286 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 TRGV8A0A0C4DH27 118 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 ITGA5P08648 1049 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 OR8G3PP0DMU2 310 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 PSMB9P28065 219 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 FOXG1P55316 489 aaPredicted RBP9□□□□□ -0.97
VIPAS39-201ENST00000327028 ROM1Q03395 351 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 AQP6Q13520 282 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 DOC2BQ14184 412 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 MED22Q15528 200 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 TMEM211Q6ICI0 200 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 KLHL24Q6TFL4 600 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 DCXRQ7Z4W1 244 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 OR2AJ1Q8NGZ0 328 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 THEM6Q8WUY1 208 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 SPRYD4Q8WW59 207 aaPredicted RBP9□□□□□ -0.97
VIPAS39-201ENST00000327028 C4orf36Q96KX1 117 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 COG8Q96MW5 612 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 AMELYQ99218 206 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 ISYNA1Q9NPH2 558 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 ASH2LQ9UBL3 628 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 GDF2Q9UK05 429 aaPredicted RBP9□□□□□ -0.97
VIPAS39-201ENST00000327028 MEMO1Q9Y316 297 aa9□□□□□ -0.97
VIPAS39-201ENST00000327028 COL6A6A6NMZ7 2263 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 A0A0G2JNJ9 132 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 SULT1C4O75897 302 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 FARS2O95363 451 aaKnown RBP8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 COX5AP20674 150 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 OPRM1P35372 400 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 HIST1H3AP68431 136 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 ACSM1Q08AH1 577 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 RAB39AQ14964 217 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 TIGD6Q17RP2 521 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 HIST2H3PS2Q5TEC6 136 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 C9orf135Q5VTT2 229 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 KCTD18Q6PI47 426 aaPredicted RBP8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 CORO6Q6QEF8 472 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 PLEKHG7Q6ZR37 379 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 HIST2H3AQ71DI3 136 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 OR1K1Q8NGR3 316 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 OR8B4Q96RC9 309 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 WACQ9BTA9 647 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 OPN3Q9H1Y3 402 aaPredicted RBP8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 PIGMQ9H3S5 423 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 C1orf198Q9H425 327 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 ISG20L2Q9H9L3 353 aaKnown RBP8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 Q9UFV3 132 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 METTL15A6NJ78 407 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 ABHD16AO95870 558 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 KRT8P05787 483 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 BDH1Q02338 343 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 MLLT11Q13015 90 aaPredicted RBP8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 TP53I3Q53FA7 332 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 ANKRD16Q6P6B7 361 aa8.99□□□□□ -0.97
VIPAS39-201ENST00000327028 FAM220AQ7Z4H9 259 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms