RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 SPARCP09486 303 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
PRPF18-201ENST00000320054 B4GALT1P15291 398 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 ALOX5APP20292 161 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 MVKQ03426 396 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 AQP6Q13520 282 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 IRF3Q14653 427 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 GABRA6Q16445 453 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 SLC25A35Q3KQZ1 300 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 SFRP5Q5T4F7 317 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 C1QTNF12Q5T7M4 302 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 C9orf135Q5VTT2 229 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 OR7E24Q6IFN5 339 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 KLHL24Q6TFL4 600 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 DPY19L4Q7Z388 723 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 DPPA2Q7Z7J5 298 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 EGFL6Q8IUX8 553 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 CCDC36Q8IYA8 594 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 TSPAN14Q8NG11 270 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 OR10H4Q8NGA5 316 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 SGCDQ92629 289 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 BCL2L2Q92843 193 aaPredicted RBP11.93□□□□□ -0.5
PRPF18-201ENST00000320054 CCDC120Q96HB5 630 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 MYCBPQ99417 103 aaPredicted RBP11.93□□□□□ -0.5
PRPF18-201ENST00000320054 ZNF416Q9BWM5 594 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 CDADC1Q9BWV3 514 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 HDHD5Q9BXW7 423 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 ERRFI1Q9UJM3 462 aaPredicted RBP11.93□□□□□ -0.5
PRPF18-201ENST00000320054 LHFPL6Q9Y693 200 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 HCFC1P51610 2035 aa11.93□□□□□ -0.5
PRPF18-201ENST00000320054 A0A087WXM4 84 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 A0A1W2PQL4 384 aaPredicted RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 DAPL1A0PJW8 107 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 TRIM64CA6NLI5 447 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 EEF1E1-BLOC1S5C9J1V9 151 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ZNF670-ZNF695F2Z2N8 137 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 EEF1E1O43324 174 aaKnown RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 SEC14L2O76054 403 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 MT-ND2P03891 347 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 RPSAP08865 295 aaKnown RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ADRA2AP08913 450 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 LIMS3P0CW19 117 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 LIMS4P0CW20 117 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 PSKH1P11801 424 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 MYL12AP19105 171 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 PSMB1P20618 241 aaKnown RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 C21orf33P30042 268 aaPredicted RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 CDH15P55291 814 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 PCBD1P61457 104 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 HIST1H3AP68431 136 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ZNF85Q03923 595 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 PIGFQ07326 219 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 FBXL19-AS1Q494R0 122 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 HIST2H3PS2Q5TEC6 136 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 SLC18B1Q6NT16 456 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 HIST2H3AQ71DI3 136 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 CXorf67Q86X51 503 aaPredicted RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 SKA3Q8IX90 412 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 C17orf78Q8N4C9 275 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 OR2AJ1Q8NGZ0 328 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 LILRB4Q8NHJ6 448 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ST7LQ8TDW4 575 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 SMAP2Q8WU79 429 aaPredicted RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ASB17Q8WXJ9 295 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 MRPL48Q96GC5 212 aaKnown RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 SH3GL3Q99963 347 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ZNF649Q9BS31 505 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 KCNN2Q9H2S1 579 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 CHCHD3Q9NX63 227 aaKnown RBP11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ERVK13-1Q9NX77 482 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 LAMP5Q9UJQ1 280 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 POLR1DQ9Y2S0 133 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 SNX5Q9Y5X3 404 aa11.92□□□□□ -0.5
PRPF18-201ENST00000320054 ARPC4-TTLL3A0A0A6YYG9 625 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 TMEM129A0AVI4 362 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 CIB4A0PJX0 185 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 LYZL6O75951 148 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 AGAP20933 346 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 CD79BP40259 229 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 ETV1P50549 477 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 ASCL1P50553 236 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 HCCSP53701 268 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 TUBA4AP68366 448 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 EIF2B1Q14232 305 aaKnown RBP11.91□□□□□ -0.5
PRPF18-201ENST00000320054 GALEQ14376 348 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 TBRG1Q3YBR2 411 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 OTPQ5XKR4 325 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 STAC2Q6ZMT1 411 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 RHOUQ7L0Q8 258 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 BHLHA15Q7RTS1 189 aaPredicted RBP11.91□□□□□ -0.5
PRPF18-201ENST00000320054 SLC16A14Q7RTX9 510 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 LUZP2Q86TE4 346 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 SPARTQ8N0X7 666 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 LRRC18Q8N456 261 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 SVOPQ8N4V2 548 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 GJC3Q8NFK1 279 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 NANOS1Q8WY41 292 aaKnown RBP11.91□□□□□ -0.5
PRPF18-201ENST00000320054 HTRA1Q92743 480 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 FBXO17Q96EF6 278 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms