RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 LRRC69Q6ZNQ3 347 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 HOXB13Q92826 284 aaPredicted RBP14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 ADAD1Q96M93 576 aaKnown RBP14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 OR11A1Q9GZK7 315 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 INPP5EQ9NRR6 644 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC39A1Q9NY26 324 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 SERTAD3Q9UJW9 196 aa14.03□□□□□ -0.16
SHROOM1-201ENST00000319854 LILRA5A6NI73 299 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 SMAD9O15198 467 aaKnown RBP14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 ITGA10O75578 1167 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 OPN1LWP04000 364 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 FBLP22087 321 aaKnown RBP14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 DIO1P49895 249 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 ZNF74Q16587 644 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 MOB3CQ70IA8 216 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC35D2Q76EJ3 337 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 DPY19L4Q7Z388 723 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 SLC25A45Q8N413 288 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 WDR76Q9H967 626 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 FGF21Q9NSA1 209 aa14.02□□□□□ -0.16
SHROOM1-201ENST00000319854 DISC1C4P0D8 188 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 APOC1P02654 83 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 OR2T7P0C7T2 308 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 CXCR1P25024 350 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 NXPH1P58417 271 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 HAGHLQ6PII5 290 aaPredicted RBP14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 C9orf40Q8IXQ3 194 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 OR2T27Q8NH04 317 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 MNTQ99583 582 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 TSNAXQ99598 290 aaKnown RBP14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 MMP25Q9NPA2 562 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 TMEM138Q9NPI0 162 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 RXFP3Q9NSD7 469 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 GP1BAP07359 652 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 RPA2P15927 270 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 CNR1P21554 472 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 SMAD2Q15796 467 aaKnown RBP14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 ATG4DQ86TL0 474 aaPredicted RBP14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 OR4C16Q8NGL9 310 aa14.02□□□□□ -0.17
SHROOM1-201ENST00000319854 FER1L5A0AVI2 2057 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 UBE2QL1A1L167 161 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 MEIS3P1A6NDR6 274 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 ZFPL1O95159 310 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 DDAH2O95865 285 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 SERPINA3P01011 423 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 SPP1P10451 314 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 PPICP45877 212 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 S100A12P80511 92 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 SMAD4Q13485 552 aaKnown RBP14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 YOD1Q5VVQ6 348 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 C11orf88Q6PI97 169 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 DUSP19Q8WTR2 217 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 PMM1Q92871 262 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 S100A16Q96FQ6 103 aaKnown RBP14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 EML5Q05BV3 1969 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 FREM3P0C091 2139 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 TRAV20A0A0B4J274 112 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 C10orf142B7Z368 130 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 H0YC42 278 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 H0YIG0 161 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 AKR7A3O95154 331 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 LUMP51884 338 aaPredicted RBP14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 TAS2R20P59543 309 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 NANPQ8TBE9 248 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 TNFAIP8L1Q8WVP5 186 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 VN1R1Q9GZP7 353 aa14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 PRRC2CQ9Y520 2896 aaKnown RBP14.01□□□□□ -0.17
SHROOM1-201ENST00000319854 STARP49675 285 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 CPEB4Q17RY0 729 aaKnown RBP eCLIP14□□□□□ -0.17
SHROOM1-201ENST00000319854 RAB11FIP2Q7L804 512 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 ZNF546Q86UE3 836 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 TMEM17Q86X19 198 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 OR1S2Q8NGQ3 325 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 ZNF721Q8TF20 911 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 GAL3ST1Q99999 423 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 TMEM185BQ9H7F4 350 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 SLC22A11Q9NSA0 550 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 ICAM5Q9UMF0 924 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 GPR179Q6PRD1 2367 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 TMEM131Q92545 1883 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 PQLC2LA1A4F0 135 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 BCAT2O15382 392 aaPredicted RBP14□□□□□ -0.17
SHROOM1-201ENST00000319854 SLC25A12O75746 678 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 EIF3GO75821 320 aaKnown RBP eCLIP14□□□□□ -0.17
SHROOM1-201ENST00000319854 IL33O95760 270 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 CD14P08571 375 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 PVALBP20472 110 aaPredicted RBP14□□□□□ -0.17
SHROOM1-201ENST00000319854 SRSF3P84103 164 aaKnown RBP14□□□□□ -0.17
SHROOM1-201ENST00000319854 POU4F2Q12837 409 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 BIKQ13323 160 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 PCGF3Q3KNV8 242 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 UNQ9370/PRO34162Q6UXP9 181 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 OR14A16Q8NHC5 309 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 SLC46A1Q96NT5 459 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 COPS7AQ9UBW8 275 aa14□□□□□ -0.17
SHROOM1-201ENST00000319854 SHISA8B8ZZ34 492 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 DUX1O43812 170 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 SNAPC5O75971 98 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 COL4A2P08572 1712 aa13.99□□□□□ -0.17
SHROOM1-201ENST00000319854 ACAA1P09110 424 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 240.2 ms