RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 UPK3AO75631 287 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 RLN2P04090 185 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 OR4E1P0C645 316 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 RORAP35398 523 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 MESTQ5EB52 335 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 FAM122CQ6P4D5 195 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 GPAT4Q86UL3 456 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 LINC00346Q8IVM7 164 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 FAM174AQ8TBP5 190 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 PNPLA2Q96AD5 504 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 ZBTB8AQ96BR9 441 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 C4orf45Q96LM5 186 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 TSPAN32Q96QS1 320 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 SLC19A3Q9BZV2 496 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 HIF3AQ9Y2N7 669 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 NPTNQ9Y639 398 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 DNAH14Q0VDD8 3507 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 DISC1C4P0D8 188 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 PHYHO14832 338 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 DLSTP36957 453 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 ZP2Q05996 745 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 FZD2Q14332 565 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 ACKR1Q16570 336 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 RHOUQ7L0Q8 258 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 OR4S1Q8NGB4 309 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 OR6N1Q8NGY5 312 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 FLVCR1-AS1Q8TAF5 88 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 THRSPQ92748 146 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 TAAR8Q969N4 342 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 TSNAXQ99598 290 aaKnown RBP9.51□□□□□ -0.89
COL3A1-202ENST00000317840 ZCCHC4Q9H5U6 513 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 PCOLCE2Q9UKZ9 415 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 RNF215Q9Y6U7 377 aa9.51□□□□□ -0.89
COL3A1-202ENST00000317840 MED12Q93074 2177 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 CACNA1GO43497 2377 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 D6RAR5 112 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 IL13RA1P78552 427 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 MC2RQ01718 297 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 SMAD4Q13485 552 aaKnown RBP9.5□□□□□ -0.89
COL3A1-202ENST00000317840 ETFDHQ16134 617 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 MDGA2Q7Z553 956 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 CCDC36Q8IYA8 594 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 PXT1Q8NFP0 134 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 OR2I1PQ8NGU4 316 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 LRRC61Q9BV99 259 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 SLC6A15Q9H2J7 730 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 COPS7AQ9UBW8 275 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 GPN3Q9UHW5 284 aaPredicted RBP9.5□□□□□ -0.89
COL3A1-202ENST00000317840 COLQQ9Y215 455 aaPredicted RBP9.5□□□□□ -0.89
COL3A1-202ENST00000317840 HS3ST3A1Q9Y663 406 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 CACNA1HO95180 2353 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 OR5H14A6NHG9 310 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 SLC25A1P53007 311 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 GLO1Q04760 184 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 FHL1Q13642 323 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 C3orf33Q6P1S2 294 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 KLHL24Q6TFL4 600 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 OR11A1Q9GZK7 315 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 SAV1Q9H4B6 383 aaPredicted RBP9.5□□□□□ -0.89
COL3A1-202ENST00000317840 HHLA2Q9UM44 414 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 IGKV1D-42A0A075B6H8 117 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 TMEM269A0A1B0GVZ9 245 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 TUBAL3A6NHL2 446 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 C17orf51A8MQB3 221 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 FOXL2P58012 376 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 SERTAD2Q14140 314 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 UNQ6126/PRO20091Q6UXV3 157 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 TMEM17Q86X19 198 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 CDH26Q8IXH8 852 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 OR1J4Q8NGS1 313 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 OR1J2Q8NGS2 313 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 OTOSQ8NHW6 89 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 TSLPQ969D9 159 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF587Q96SQ5 575 aaPredicted RBP9.5□□□□□ -0.89
COL3A1-202ENST00000317840 SEC61A2Q9H9S3 476 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 ASF1BQ9NVP2 202 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 EPHA6Q9UF33 1036 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 GPR160Q9UJ42 338 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 B9D1Q9UPM9 204 aa9.5□□□□□ -0.89
COL3A1-202ENST00000317840 FREM3P0C091 2139 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 IGHV3-20A0A0C4DH32 117 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 NPIPA5E9PKD4 350 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 TGFBR3LH3BV60 316 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 SLC17A2O00624 439 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 LAMTOR5O43504 91 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ICOSLGO75144 302 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF254O75437 659 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 PMS2P2O95744 297 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 PRKACAP17612 351 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 PGCP20142 388 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 GPR3P46089 330 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 EGR3Q06889 387 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 FGL1Q08830 312 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 SLC17A1Q14916 467 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 TOMM34Q15785 309 aaPredicted RBP9.49□□□□□ -0.89
COL3A1-202ENST00000317840 NUP54Q7Z3B4 507 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 GALNTL5Q7Z4T8 443 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 FOXRED2Q8IWF2 684 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF679Q8IYX0 411 aa9.49□□□□□ -0.89
COL3A1-202ENST00000317840 ZNF321PQ8N8H1 164 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms