RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 FAM3DQ96BQ1 224 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 SMOC1Q9H4F8 434 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 ITGB1BP2Q9UKP3 347 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 NPIPA1Q9UND3 350 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
CLK4-201ENST00000316308 AHCTF1Q8WYP5 2266 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 TMEM272A0A1B0GTI8 110 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 A0A1B0GTQ1 180 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 P2RY10O00398 339 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 PEX14O75381 377 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 CFIP05156 583 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 CCL4P13236 92 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 SFTPDP35247 375 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 ROM1Q03395 351 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 CCDC92Q53HC0 331 aaPredicted RBP13.19□□□□□ -0.3
CLK4-201ENST00000316308 GLYATL3Q5SZD4 288 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 OR10S1Q8NGN2 331 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 ZNF431Q8TF32 576 aaPredicted RBP13.19□□□□□ -0.3
CLK4-201ENST00000316308 OR2M2Q96R28 347 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 GAREM1Q9H706 876 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 METTL17Q9H7H0 456 aaPredicted RBP13.19□□□□□ -0.3
CLK4-201ENST00000316308 NOX3Q9HBY0 568 aa13.19□□□□□ -0.3
CLK4-201ENST00000316308 PRRC2CQ9Y520 2896 aaKnown RBP13.18□□□□□ -0.3
CLK4-201ENST00000316308 LIPT2A6NK58 231 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 VSTM2BA6NLU5 285 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 MEN1O00255 615 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 OR2T1O43869 369 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 IGHMP01871 453 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 SULT1A3P0DMM9 295 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 SULT1A4P0DMN0 295 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 PTGS2P35354 604 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 RIDAP52758 137 aaKnown RBP13.18□□□□□ -0.3
CLK4-201ENST00000316308 OC90Q02509 493 aaPredicted RBP13.18□□□□□ -0.3
CLK4-201ENST00000316308 ACY1Q03154 408 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 NR0B2Q15466 257 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 NDUFA5Q16718 116 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 RSPO4Q2I0M5 234 aaPredicted RBP13.18□□□□□ -0.3
CLK4-201ENST00000316308 C2orf68Q2NKX9 166 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 PCGF3Q3KNV8 242 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 SLC25A28Q96A46 364 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 EMC7Q9NPA0 242 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 DLL4Q9NR61 685 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 SERINC1Q9NRX5 453 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 PPP4R1LQ9P1A2 415 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 DHDHQ9UQ10 334 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 RPH3AQ9Y2J0 694 aaPredicted RBP13.18□□□□□ -0.3
CLK4-201ENST00000316308 GGT3PA6NGU5 568 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 PYCARD-AS1I3L0S3 204 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 RAB40ALP0C0E4 278 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 SLC2A1P11166 492 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 S100A1P23297 94 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 PLPPR5Q32ZL2 321 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 CD276Q5ZPR3 534 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 B3GNTL1Q67FW5 361 aaPredicted RBP13.18□□□□□ -0.3
CLK4-201ENST00000316308 NHLRC1Q6VVB1 395 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 ZNF227Q86WZ6 799 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 PLCZ1Q86YW0 608 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 OR4C16Q8NGL9 310 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 NUBPLQ8TB37 319 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 RAB40AQ8WXH6 277 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 TMEM234Q8WY98 164 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 SLC25A44Q96H78 314 aaPredicted RBP13.18□□□□□ -0.3
CLK4-201ENST00000316308 CMTM3Q96MX0 182 aa13.18□□□□□ -0.3
CLK4-201ENST00000316308 TMEM269A0A1B0GVZ9 245 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 LOC107986453A0A1B0GWG9 222 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 A0A1W2PPC1 479 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 XRCC3O43542 346 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 ANXA3P12429 323 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 LGALSLQ3ZCW2 172 aaPredicted RBP13.17□□□□□ -0.3
CLK4-201ENST00000316308 FAM166AQ6J272 317 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 FDX2Q6P4F2 183 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 BAIAP2L2Q6UXY1 529 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 NLRC3Q7RTR2 1065 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 PPP1R3BQ86XI6 285 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 C11orf40Q8WZ69 217 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 HYLS1Q96M11 299 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 RASL10BQ96S79 203 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 METTL7AQ9H8H3 244 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 CHST11Q9NPF2 352 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 PILRBQ9UKJ0 227 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 WIPF3A6NGB9 483 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 RAF1P04049 648 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 VSIG10L2P0DP72 767 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 ANKRD16Q6P6B7 361 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 ZNF248Q8NDW4 579 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 MFSD8Q8NHS3 518 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 ST8SIA1Q92185 356 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 CITED4Q96RK1 184 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 GON7Q9BXV9 100 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 CHST6Q9GZX3 395 aa13.17□□□□□ -0.3
CLK4-201ENST00000316308 CFAP47Q6ZTR5 3102 aa13.16□□□□□ -0.3
CLK4-201ENST00000316308 MEIKINA0A087WXM9 373 aa13.16□□□□□ -0.3
CLK4-201ENST00000316308 ACOT7O00154 380 aa13.16□□□□□ -0.3
CLK4-201ENST00000316308 SIX6O95475 246 aa13.16□□□□□ -0.3
CLK4-201ENST00000316308 MAP2K6P52564 334 aa13.16□□□□□ -0.3
CLK4-201ENST00000316308 PMS2CLQ68D20 193 aa13.16□□□□□ -0.3
CLK4-201ENST00000316308 KCTD18Q6PI47 426 aaPredicted RBP13.16□□□□□ -0.3
CLK4-201ENST00000316308 SEZ6L2Q6UXD5 910 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms