RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 AUNIPQ9H7T9 357 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 OR14J1Q9UGF5 321 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 FLVCR2Q9UPI3 526 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 TRAPPC4Q9Y296 219 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 HSPB6O14558 160 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 CD79BP40259 229 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 SRPXP78539 464 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 WDR5BQ86VZ2 330 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 NAXDQ8IW45 347 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 PRSS35Q8N3Z0 413 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 OR5M1Q8NGP8 315 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 OCSTAMPQ9BR26 566 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 PCDHGA5Q9Y5G8 931 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 PRSS37A4D1T9 235 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 FGF9P31371 208 aaPredicted RBP12.55□□□□□ -0.4
SPAST-201ENST00000315285 OGFOD3Q6PK18 319 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 FJX1Q86VR8 437 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 AMER3Q8N944 861 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 STT3BQ8TCJ2 826 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 GCDHQ92947 438 aaPredicted RBP12.55□□□□□ -0.4
SPAST-201ENST00000315285 ORAI1Q96D31 301 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 GPATCH2Q9NW75 528 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 ATPIF1Q9UII2 106 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 FOCADQ5VW36 1801 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 GPR171O14626 319 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 IFNA10P01566 189 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 CD46P15529 392 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 MSMO1Q15800 293 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 AADACL3Q5VUY0 350 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 MFSD4AQ8N468 514 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 OR51E1Q8TCB6 317 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 UTP23Q9BRU9 249 aaKnown RBP12.55□□□□□ -0.4
SPAST-201ENST00000315285 GAREM1Q9H706 876 aa12.55□□□□□ -0.4
SPAST-201ENST00000315285 AGAP14A8MT82 685 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 CBX7O95931 251 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 ZNF133P52736 654 aaPredicted RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 PCBP4P57723 403 aaKnown RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 CAMK2BQ13554 666 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 ABHD5Q8WTS1 349 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 MALSU1Q96EH3 234 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 MVB12AQ96EY5 273 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 DERL3Q96Q80 235 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 SSX3Q99909 188 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 ASH2LQ9UBL3 628 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 KCNG2Q9UJ96 466 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 SLC22A13Q9Y226 551 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 HSPB2A8KAH6 182 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 IGHA2P01877 340 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 RAB4BP61018 213 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 HSPB2Q16082 182 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 PTCRAQ6ISU1 281 aaPredicted RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 GRAMD2AQ8IUY3 354 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 MAML2Q8IZL2 1156 aaPredicted RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 HAS2Q92819 552 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 WWTR1Q9GZV5 400 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 KCND3Q9UK17 655 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 POMT2Q9UKY4 750 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 RP1L1Q8IWN7 2480 aaPredicted RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 TRAV1-2A0A0B4J238 106 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 CEBPZOSA8MTT3 80 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 CRYBB2P43320 205 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 GFERP55789 205 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 RPP30P78346 268 aaKnown RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 SSX1Q16384 188 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 KIAA0907Q7Z7F0 614 aaPredicted RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 LINC01555Q8NAE3 123 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 FAM213BQ8TBF2 198 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 SDSLQ96GA7 329 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 MED30Q96HR3 178 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 OR2A14Q96R47 310 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 TRAPPC2LQ9UL33 140 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 CNR1P21554 472 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 IL32P24001 234 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 FKBP2P26885 142 aaKnown RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 ECI1P42126 302 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 RFX2P48378 723 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 C2orf76Q3KRA6 126 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 SLC22A25Q6T423 547 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 RPS19BP1Q86WX3 136 aaKnown RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 OR2G2Q8NGZ5 317 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 SMIM4Q8WVI0 70 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 ATOH1Q92858 354 aaPredicted RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 ABHD6Q9BV23 337 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 TXNIPQ9H3M7 391 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 CALHM2Q9HA72 323 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 ING1Q9UK53 422 aaPredicted RBP12.54□□□□□ -0.4
SPAST-201ENST00000315285 PADI1Q9ULC6 663 aa12.54□□□□□ -0.4
SPAST-201ENST00000315285 A0A1W2PPC4 97 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 PLSCR5A0PG75 271 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 STMND1H3BQB6 276 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 PHF1O43189 567 aaPredicted RBP12.53□□□□□ -0.4
SPAST-201ENST00000315285 CISD3P0C7P0 127 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 MZT1Q08AG7 82 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 SLC17A1Q14916 467 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 EXT1Q16394 746 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 OR10R2Q8NGX6 335 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 LIPHQ8WWY8 451 aa12.53□□□□□ -0.4
SPAST-201ENST00000315285 CPNE4Q96A23 557 aaPredicted RBP12.53□□□□□ -0.4
SPAST-201ENST00000315285 JAM3Q9BX67 310 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms