RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 NOXO1Q8NFA2 376 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 OR1J1Q8NGS3 322 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 OR51F2Q8NH61 342 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 MOSPD2Q8NHP6 518 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 PFN4Q8NHR9 129 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 WDR89Q96FK6 387 aaPredicted RBP6.95□□□□□ -1.3
TPM3-203ENST00000312970 LRRC37BQ96QE4 947 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 TSPAN32Q96QS1 320 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 RBP7Q96R05 134 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 TXNIPQ9H3M7 391 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 VIPAS39Q9H9C1 493 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 SMURF2Q9HAU4 748 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 CCNB1IP1Q9NPC3 277 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 C20orf141Q9NUB4 165 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 PLA2G2EQ9NZK7 142 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 MED31Q9Y3C7 131 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 TRRAPQ9Y4A5 3859 aa6.95□□□□□ -1.3
TPM3-203ENST00000312970 IGHV1-69-2A0A0G2JMI3 117 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 LOC100653049A0A140TA62 436 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 GMNCA6NCL1 334 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 NPIPB13A6NJU9 1138 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 BBIP1A8MTZ0 92 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 NPIPB4C9JG80 1138 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 SHOX2O60902 331 aaPredicted RBP6.94□□□□□ -1.3
TPM3-203ENST00000312970 KRT34O76011 436 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 SLC2A10O95528 541 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 SCG5P05408 212 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 ITGA2P17301 1181 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 GCH1P30793 250 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 CDAP32320 146 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 IFNA8P32881 189 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 KDELR2P33947 212 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 SELENOWP63302 87 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 MVKQ03426 396 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 ST3GAL3Q11203 375 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 HFEQ30201 348 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 CYBRD1Q53TN4 286 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 PABPC1L2AQ5JQF8 200 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 THEM4Q5T1C6 240 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 FAM27BQ5VT28 67 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 FAHD2BQ6P2I3 314 aaPredicted RBP6.94□□□□□ -1.3
TPM3-203ENST00000312970 SHQ1Q6PI26 577 aaKnown RBP6.94□□□□□ -1.3
TPM3-203ENST00000312970 SLC25A47Q6Q0C1 308 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 OVCH2Q7RTZ1 564 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 KRT77Q7Z794 578 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 OR2C3Q8N628 320 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 TEX29Q8N6K0 151 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 PCYOX1LQ8NBM8 494 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 PPP1R35Q8TAP8 253 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 FNDC8Q8TC99 324 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 NSMAFQ92636 917 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 HDAC2Q92769 488 aaKnown RBP6.94□□□□□ -1.3
TPM3-203ENST00000312970 BPIFA2Q96DR5 249 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 FAHD2AQ96GK7 314 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 POM121L2Q96KW2 1035 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 TMEM120AQ9BXJ8 343 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 METTL17Q9H7H0 456 aaPredicted RBP6.94□□□□□ -1.3
TPM3-203ENST00000312970 LPAR2Q9HBW0 351 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 GID8Q9NWU2 228 aa6.94□□□□□ -1.3
TPM3-203ENST00000312970 LOC100509620A0A075B734 347 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 IGKV1D-43A0A0B4J1Z2 117 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 PLSCR5A0PG75 271 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 C5orf49A4QMS7 147 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 FXYD1O00168 92 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 MRASO14807 208 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 PLPP2O43688 288 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 MPZL1O95297 269 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 CST2P09228 141 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 TROVE2P10155 538 aaKnown RBP eCLIP6.93□□□□□ -1.3
TPM3-203ENST00000312970 IFI30P13284 250 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 ZNF32P17041 273 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 PEX2P28328 305 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 LIPAP38571 399 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 GDI2P50395 445 aaKnown RBP6.93□□□□□ -1.3
TPM3-203ENST00000312970 ZNF81P51508 661 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 ARFIP2P53365 341 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 RPL27P61353 136 aaKnown RBP6.93□□□□□ -1.3
TPM3-203ENST00000312970 PCBD1P61457 104 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 PSG4Q00888 419 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 CD47Q08722 323 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 KLF10Q13118 480 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 MAPRE2Q15555 327 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 TSTQ16762 297 aaKnown RBP6.93□□□□□ -1.3
TPM3-203ENST00000312970 ALG10Q5BKT4 473 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 AVPI1Q5T686 147 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 ZBTB37Q5TC79 503 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 C1orf122Q6ZSJ8 110 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 USP51Q70EK9 711 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 AKR7LQ8NHP1 331 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 ZNF418Q8TF45 676 aaPredicted RBP6.93□□□□□ -1.3
TPM3-203ENST00000312970 ZFAND2BQ8WV99 257 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 LZICQ8WZA0 190 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 RAB1CQ92928 201 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 NABP1Q96AH0 204 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 NMD3Q96D46 503 aaKnown RBP6.93□□□□□ -1.3
TPM3-203ENST00000312970 RAB39BQ96DA2 213 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 MARS2Q96GW9 593 aaKnown RBP6.93□□□□□ -1.3
TPM3-203ENST00000312970 TIMD4Q96H15 378 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 TPD52L3Q96J77 140 aa6.93□□□□□ -1.3
TPM3-203ENST00000312970 ALG12Q9BV10 488 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms