RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 NDNFQ8TB73 568 aa19.91■□□□□ 0.78
IRF3-201ENST00000309877 NELFAQ9H3P2 528 aa19.91■□□□□ 0.78
IRF3-201ENST00000309877 ELOVL3Q9HB03 270 aa19.91■□□□□ 0.78
IRF3-201ENST00000309877 OR6C65A6NJZ3 312 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 HSPB2A8KAH6 182 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 HLA-DPB1P04440 258 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 CD53P19397 219 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 TGM4P49221 684 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 ROM1Q03395 351 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 HSPB2Q16082 182 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 LINC00303Q3SY05 128 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 DMKNQ6E0U4 476 aaPredicted RBP19.9■□□□□ 0.78
IRF3-201ENST00000309877 FOXL2NBQ6ZUU3 175 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 CPT1CQ8TCG5 803 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 HTRA1Q92743 480 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 ALKBH3Q96Q83 286 aaPredicted RBP19.9■□□□□ 0.78
IRF3-201ENST00000309877 C1orf198Q9H425 327 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 GP6Q9HCN6 339 aa19.9■□□□□ 0.78
IRF3-201ENST00000309877 TRBV2A0A0J9YWF9 115 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 ABHD16AO95870 558 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 TGFBR1P36897 503 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 RIDAP52758 137 aaKnown RBP19.89■□□□□ 0.77
IRF3-201ENST00000309877 LSM6P62312 80 aaKnown RBP19.89■□□□□ 0.77
IRF3-201ENST00000309877 CDK5R1Q15078 307 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 KRTCAP3Q53RY4 240 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 ADGRE4PQ86SQ3 457 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 ZNF100Q8IYN0 542 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 KBTBD8Q8NFY9 601 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 ST7LQ8TDW4 575 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 LINC00470Q9BZP3 86 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 RNF167Q9H6Y7 350 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 CLCF1Q9UBD9 225 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 TUBD1Q9UJT1 453 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 DMXL2Q8TDJ6 3036 aa19.89■□□□□ 0.77
IRF3-201ENST00000309877 AHRRA9YTQ3 701 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 ZNF182P17025 639 aaPredicted RBP19.88■□□□□ 0.77
IRF3-201ENST00000309877 GDI2P50395 445 aaKnown RBP19.88■□□□□ 0.77
IRF3-201ENST00000309877 TRAM1Q15629 374 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 TSPO2Q5TGU0 170 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 USP43Q70EL4 1123 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 APH1AQ96BI3 265 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 SMIM19Q96E16 107 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 ZNF837Q96EG3 531 aaPredicted RBP19.88■□□□□ 0.77
IRF3-201ENST00000309877 TSC22D3Q99576 134 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 GPR35Q9HC97 309 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 GLRX2Q9NS18 164 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 CENPMQ9NSP4 180 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 ASH2LQ9UBL3 628 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 GDF2Q9UK05 429 aaPredicted RBP19.88■□□□□ 0.77
IRF3-201ENST00000309877 LHFPL6Q9Y693 200 aa19.88■□□□□ 0.77
IRF3-201ENST00000309877 IGHV3-9P01782 118 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 NPR2P20594 1047 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 UGT2B10P36537 528 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 MRPS34P82930 218 aaKnown RBP19.87■□□□□ 0.77
IRF3-201ENST00000309877 FABP5Q01469 135 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 ROR2Q01974 943 aaKnown RBP19.87■□□□□ 0.77
IRF3-201ENST00000309877 NUFIP2Q7Z417 695 aaKnown RBP19.87■□□□□ 0.77
IRF3-201ENST00000309877 GHSRQ92847 366 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 NABP1Q96AH0 204 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 GMPPAQ96IJ6 420 aaPredicted RBP19.87■□□□□ 0.77
IRF3-201ENST00000309877 COQ7Q99807 217 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 ZNF416Q9BWM5 594 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 HDHD5Q9BXW7 423 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 DCSTAMPQ9H295 470 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 GSTK1Q9Y2Q3 226 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 TRDV1A0A1B0GX56 115 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 ZNF254O75437 659 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 AGTR1P30556 359 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 SF3B4Q15427 424 aaKnown RBP eCLIP19.87■□□□□ 0.771e-6■■■■■ 30.8
IRF3-201ENST00000309877 CEACAM16Q2WEN9 425 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 OR7E24Q6IFN5 339 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 ZNF585AQ6P3V2 769 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 CD200R1LQ6Q8B3 271 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 LINGO2Q7L985 606 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.87■□□□□ 0.77
IRF3-201ENST00000309877 RNF133Q8WVZ7 376 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 SLAMF6Q96DU3 332 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 TRMT61AQ96FX7 289 aaKnown RBP19.87■□□□□ 0.77
IRF3-201ENST00000309877 MAP6Q96JE9 813 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 SLC7A10Q9NS82 523 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 TXNL4BQ9NX01 149 aaKnown RBP19.87■□□□□ 0.77
IRF3-201ENST00000309877 UPB1Q9UBR1 384 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 LRP12Q9Y561 859 aa19.87■□□□□ 0.77
IRF3-201ENST00000309877 MED19A0JLT2 244 aaPredicted RBP19.86■□□□□ 0.77
IRF3-201ENST00000309877 RGS9O75916 674 aaPredicted RBP19.86■□□□□ 0.77
IRF3-201ENST00000309877 WNT11O96014 354 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 CD1AP06126 327 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 H2BFMP0C1H6 154 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 SERPINB10P48595 397 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 TUBA1BP68363 451 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 ALKBH1Q13686 389 aaKnown RBP19.86■□□□□ 0.77
IRF3-201ENST00000309877 C22orf42Q6IC83 251 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 DEGS2Q6QHC5 323 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 TUBA1AQ71U36 451 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 LRRC18Q8N456 261 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 CISD2Q8N5K1 135 aaKnown RBP19.86■□□□□ 0.77
IRF3-201ENST00000309877 MS4A15Q8N5U1 240 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 WNT2BQ93097 391 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 PGLYRP3Q96LB9 341 aa19.86■□□□□ 0.77
IRF3-201ENST00000309877 SIAEQ9HAT2 523 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms