RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 OR4M2Q8NGB6 313 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 OR4M1Q8NGD0 313 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 OR5H6Q8NGV6 325 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 OR56B4Q8NH76 319 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 NT5CQ8TCD5 201 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF431Q8TF32 576 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 YIPF5Q969M3 257 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 FOXRED1Q96CU9 486 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 GIMAP5Q96F15 307 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SLC35A4Q96G79 324 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 C16orf58Q96GQ5 468 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SAMD8Q96LT4 415 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 C10orf90Q96M02 699 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 TAAR6Q96RI8 345 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 STACQ99469 402 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 TEAD3Q99594 435 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 TIMP4Q99727 224 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 C17orf62Q9BQA9 187 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF559Q9BR84 538 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 UTP23Q9BRU9 249 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ALG8Q9BVK2 526 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF350Q9GZX5 532 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 AICDAQ9GZX7 198 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 OR51J1Q9H342 316 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 OR52D1Q9H346 318 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PRDM13Q9H4Q3 707 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 XKR8Q9H6D3 395 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PLEKHA1Q9HB21 404 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 GALNT9Q9HCQ5 603 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 MRPS30Q9NP92 439 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 NANSQ9NR45 359 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 DUSP22Q9NRW4 184 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 MED9Q9NWA0 146 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SPHK1Q9NYA1 384 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 CNIH4Q9P003 139 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 DHCR7Q9UBM7 475 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 IL20RAQ9UHF4 553 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 TEKT2Q9UIF3 430 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SCP2D1Q9UJQ7 156 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 FBXL3Q9UKT7 428 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PLAGL1Q9UM63 463 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 SPATA2Q9UM82 520 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 C19orf53Q9UNZ5 99 aaPredicted RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 RASD1Q9Y272 281 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 GPR52Q9Y2T5 361 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 PTRH2Q9Y3E5 179 aaKnown RBP4.39□□□□□ -1.71
CKS1B-201ENST00000308987 WDR45Q9Y484 360 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 CHST2Q9Y4C5 530 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 ATG4BQ9Y4P1 393 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 FKBP7Q9Y680 259 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 U3KQ87 197 aa4.39□□□□□ -1.71
CKS1B-201ENST00000308987 TEX13CA0A0J9YWL9 993 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 C2orf92A0A1B0GVN3 265 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 URADA6NGE7 173 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 CD8B2A6NJW9 211 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 RIIAD1A6NNX1 92 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF879B4DU55 563 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PRSS44E7EML9 344 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 C19orf84I3L1E1 186 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SOCS6O14544 535 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PDCD5O14737 125 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 BET1O15155 118 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 AKR7A2O43488 359 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PTP4A3O75365 173 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PEX14O75381 377 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 REM1O75628 298 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 LYPD3O95274 346 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TGM6O95932 706 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PAHP00439 452 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 IFNGP01579 166 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 THY1P04216 161 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 IFNA16P05015 189 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 EIF4EP06730 217 aaKnown RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 CHRM5P08912 532 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 UCHL1P09936 223 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 OR2T7P0C7T2 308 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SMIM10L1P0DMW3 83 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ZNF10P21506 573 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TBXA2RP21731 343 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SLC2A5P22732 501 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 PSMB5P28074 263 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SHC1P29353 583 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TLX1P31314 330 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 EVI2BP34910 448 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 GBX2P52951 348 aaPredicted RBP4.38□□□□□ -1.71
CKS1B-201ENST00000308987 CAV3P56539 151 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SCAND1P57086 179 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ACTA2P62736 377 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ACTG2P63267 376 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 TNFRSF17Q02223 184 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 RGS1Q08116 209 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 LGALS3BPQ08380 585 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 CAMK2DQ13557 499 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 GGTLC2Q14390 218 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 FCN2Q15485 313 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 GRK1Q15835 563 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 GSG1Q2KHT4 349 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 ACSM3Q53FZ2 586 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 CEP78Q5JTW2 689 aa4.38□□□□□ -1.71
CKS1B-201ENST00000308987 SLC35D3Q5M8T2 416 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms