RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CYTIPO60759 359 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 CBR1P16152 277 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 C21orf33P30042 268 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 MAP4K2Q12851 820 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 IGFN1Q86VF2 1251 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR8U1Q8NH10 309 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 WDR20Q8TBZ3 569 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ACTR3CQ9C0K3 210 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 YARS2Q9Y2Z4 477 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 HES2Q9Y543 173 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 HEATR5AQ86XA9 2040 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR5H14A6NHG9 310 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR7A17O14581 309 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 MAN2A2P49641 1150 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 S100A10P60903 97 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SYT14P1Q58G82 188 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 PDZD11Q5EBL8 140 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 NPWQ8N729 165 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ARIH2OSQ8N7S6 290 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ZNF296Q8WUU4 475 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 KTI12Q96EK9 354 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 P2RY12Q9H244 342 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 TXNIPQ9H3M7 391 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 RCE1Q9Y256 329 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 AMMECR1Q9Y4X0 333 aaPredicted RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 DENND4AQ7Z401 1863 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 TCAPO15273 167 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 ARPC5O15511 151 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 TCRBP04435 133 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 SNRPEP62304 92 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 DEFB134Q4QY38 66 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 TRMT12Q53H54 448 aaKnown RBP3.69□□□□□ -1.82
USH2A-201ENST00000307340 AADACL2Q6P093 401 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 OR9I1Q8NGQ6 314 aa3.69□□□□□ -1.82
USH2A-201ENST00000307340 FAM90A26D6RGX4 464 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 EEF1E1O43324 174 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 ATXN1LP0C7T5 689 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 NLRC3Q7RTR2 1065 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CDS1Q92903 461 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SLC2A8Q9NY64 477 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 MEIS3P1A6NDR6 274 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 PRR35P0CG20 571 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OR8G3PP0DMU2 310 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OR2B8PP59922 312 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TCTN3Q6NUS6 607 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OR2AE1Q8NHA4 323 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 LURAP1Q96LR2 239 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OCIAD1Q9NX40 245 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 APOC3P02656 99 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 HTD2P86397 168 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 RAET1LQ5VY80 246 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 WDR74Q6RFH5 385 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 RCBTB1Q8NDN9 531 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 GRHL3Q8TE85 626 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 LPPQ93052 612 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 PLXNB3Q9ULL4 1909 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 FADS1O60427 444 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CXADRP78310 365 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OR51F2Q8NH61 342 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMEM70Q9BUB7 260 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 WDR61Q9GZS3 305 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 KCNK15Q9H427 330 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 WDR54Q9H977 334 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ASF1BQ9NVP2 202 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 MBD1Q9UIS9 605 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 ANGPTL7O43827 346 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CDS2O95674 445 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 JAG1P78504 1218 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 IL13RA2Q14627 380 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CPEB2Q7Z5Q1 589 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 CDC20BQ86Y33 519 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 GALMQ96C23 342 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 RASD2Q96D21 266 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TSPAN7P41732 249 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 RPL27P61353 136 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 CDK5Q00535 292 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 OR1Q1Q15612 314 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ZNF542PQ5EBM4 170 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 LIMS2Q7Z4I7 341 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 B3GNT8Q7Z7M8 397 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 CLDN19Q8N6F1 224 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ARFGAP1Q8N6T3 406 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 LINC01465Q8N7H1 131 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 NAXEQ8NCW5 288 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 FAM3DQ96BQ1 224 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SLC25A36Q96CQ1 311 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 ZNF582Q96NG8 517 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 SOX7Q9BT81 388 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SELENOFO60613 162 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TPST2O60704 377 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 SLC10A3P09131 477 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMIGD3P0DMS9 266 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 POU3F4P49335 361 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 PTOV1Q86YD1 416 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMEM102Q8N9M5 508 aaPredicted RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMEM56Q96MV1 263 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 P2RX4Q99571 388 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 NAA50Q9GZZ1 169 aaKnown RBP3.68□□□□□ -1.82
USH2A-201ENST00000307340 TMEM231Q9H6L2 316 aa3.68□□□□□ -1.82
USH2A-201ENST00000307340 EGLN3Q9H6Z9 239 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms