RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ZNF281Q9Y2X9 895 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 NPTNQ9Y639 398 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 ARPC1BO15143 372 aaKnown RBP19.7■□□□□ 0.74
TPM4-201ENST00000300933 LPLP06858 475 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 SLC22A10Q63ZE4 541 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 ZNF385CQ66K41 422 aaPredicted RBP19.7■□□□□ 0.74
TPM4-201ENST00000300933 FAAP20Q6NZ36 180 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 UXS1Q8NBZ7 420 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 MARC2Q969Z3 335 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 ACTR6Q9GZN1 396 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 ZNF69Q9UC07 566 aa19.7■□□□□ 0.74
TPM4-201ENST00000300933 COL5A1P20908 1838 aaPredicted RBP19.7■□□□□ 0.74
TPM4-201ENST00000300933 ZNF879B4DU55 563 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 ARL6IP5O75915 188 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 AHSA1O95433 338 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 WNT11O96014 354 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 IGF2P01344 180 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 RAD52P43351 418 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 FMODQ06828 376 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 SGCBQ16585 318 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 CCDC157Q569K6 752 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 LGALS14Q8TCE9 139 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 INTS14Q96SY0 518 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 B9D1Q9UPM9 204 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 MOKQ9UQ07 419 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 PLPP3O14495 311 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 PNLIPP16233 465 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 ALOX5APP20292 161 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 RPL27P61353 136 aaKnown RBP19.69■□□□□ 0.74
TPM4-201ENST00000300933 FAM220AQ7Z4H9 259 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 NSMAFQ92636 917 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 MED29Q9NX70 200 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 PRSS37A4D1T9 235 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 SPARCP09486 303 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 FOXF1Q12946 379 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 TRIM61Q5EBN2 209 aa19.69■□□□□ 0.74
TPM4-201ENST00000300933 TRAV1-2A0A0B4J238 106 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 ABHD16AO95870 558 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 NMBP08949 121 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 RAG2P55895 527 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 SLC26A5P58743 744 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 RGS7BPQ6MZT1 257 aaPredicted RBP19.68■□□□□ 0.74
TPM4-201ENST00000300933 OR5AK2Q8NH90 309 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 EMC6Q9BV81 110 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 SIGLEC5O15389 551 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 EFNA2O43921 213 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 SIGLEC14Q08ET2 396 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 EMC4Q5J8M3 183 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 PRAMEF20Q5VT98 475 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 HAVCR2Q8TDQ0 301 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 OIT3Q8WWZ8 545 aa19.68■□□□□ 0.74
TPM4-201ENST00000300933 MRPL22Q9NWU5 206 aaKnown RBP19.68■□□□□ 0.74
TPM4-201ENST00000300933 AHCTF1Q8WYP5 2266 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 C19orf67A6NJJ6 358 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 DXOO77932 396 aaKnown RBP19.67■□□□□ 0.74
TPM4-201ENST00000300933 PTHLHP12272 177 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 TDGF1P13385 188 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 OC90Q02509 493 aaPredicted RBP19.67■□□□□ 0.74
TPM4-201ENST00000300933 C17orf67Q0P5P2 114 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 ALKBH1Q13686 389 aaKnown RBP19.67■□□□□ 0.74
TPM4-201ENST00000300933 TCEAL6Q6IPX3 200 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 NHLRC1Q6VVB1 395 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 TEX19Q8NA77 164 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 ST8SIA2Q92186 375 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 TCEAL3Q969E4 200 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 HRASLSQ9HDD0 168 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 MYOTQ9UBF9 498 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 FBXL2Q9UKC9 423 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 SLC22A13Q9Y226 551 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 PLSCR5A0PG75 271 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 TPPPO94811 219 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 MAS1P04201 325 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 PSMB1P20618 241 aaKnown RBP19.67■□□□□ 0.74
TPM4-201ENST00000300933 NFYAP23511 347 aaPredicted RBP19.67■□□□□ 0.74
TPM4-201ENST00000300933 MEIOBQ8N635 442 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 ELOVL3Q9HB03 270 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 PIPOXQ9P0Z9 390 aa19.67■□□□□ 0.74
TPM4-201ENST00000300933 COA3Q9Y2R0 106 aaPredicted RBP19.67■□□□□ 0.74
TPM4-201ENST00000300933 CPAMD8Q8IZJ3 1885 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 VSTM2BA6NLU5 285 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 H0YC42 278 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 TACSTD2P09758 323 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 IFNGR1P15260 489 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 ANXA7P20073 488 aaKnown RBP19.66■□□□□ 0.74
TPM4-201ENST00000300933 CCR9P51686 369 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 STK11Q15831 433 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 UNQ9370/PRO34162Q6UXP9 181 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 PRSS35Q8N3Z0 413 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 ZNF676Q8N7Q3 588 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 ZNF519Q8TB69 540 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 SMIM4Q8WVI0 70 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 TXNIPQ9H3M7 391 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 KLK11Q9UBX7 282 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 CAMK2AQ9UQM7 478 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 KNTC1P50748 2209 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 A0A1W2PPC1 479 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 MS4A18H0YCH9 400 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 ARPC5O15511 151 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 MT-ATP6P00846 226 aa19.66■□□□□ 0.74
TPM4-201ENST00000300933 PSMA6P60900 246 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms