RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 IGHV1OR21-1A0A087WYE8 117 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 GGT3PA6NGU5 568 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 POM121CA8CG34 1229 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 PRAF2O60831 178 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 NDUFB6O95139 128 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 GLULP15104 373 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 PSMA6P60900 246 aaKnown RBP11.6□□□□□ -0.55
HIF3A-204ENST00000300862 HNRNPKP61978 463 aaKnown RBP eCLIP11.6□□□□□ -0.55
HIF3A-204ENST00000300862 FMODQ06828 376 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 EIF2B1Q14232 305 aaKnown RBP11.6□□□□□ -0.55
HIF3A-204ENST00000300862 ZMYND11Q15326 602 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 C2orf68Q2NKX9 166 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 SFRP5Q5T4F7 317 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 RGS7BPQ6MZT1 257 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-204ENST00000300862 SLC18B1Q6NT16 456 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 SLC29A4Q7RTT9 530 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 ZNF679Q8IYX0 411 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 EID2Q8N6I1 236 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 GINS4Q9BRT9 223 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 ABHD6Q9BV23 337 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 ZMAT3Q9HA38 289 aaKnown RBP11.6□□□□□ -0.55
HIF3A-204ENST00000300862 ZNF275Q9NSD4 429 aaPredicted RBP11.6□□□□□ -0.55
HIF3A-204ENST00000300862 MTCH2Q9Y6C9 303 aa11.6□□□□□ -0.55
HIF3A-204ENST00000300862 IGLV1-36A0A0B4J1U3 117 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 ZNF354AO60765 605 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-204ENST00000300862 ANKRD16Q6P6B7 361 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 TMEM205Q6UW68 189 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 FAM198BQ6UWH4 519 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 LINC00346Q8IVM7 164 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 OR1N1Q8NGS0 311 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 FAM3DQ96BQ1 224 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 MRI1Q9BV20 369 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 FOXQ1Q9C009 403 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 ATG5Q9H1Y0 275 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 CGGBP1Q9UFW8 167 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-204ENST00000300862 NOSIPQ9Y314 301 aaKnown RBP11.59□□□□□ -0.55
HIF3A-204ENST00000300862 TEX46H3BTG2 121 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 H7C417 338 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 PLPP3O14495 311 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 CREBL2O60519 120 aaPredicted RBP11.59□□□□□ -0.55
HIF3A-204ENST00000300862 EIF4E2O60573 245 aaKnown RBP11.59□□□□□ -0.55
HIF3A-204ENST00000300862 NPIPB7O75200 414 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 ZNF432O94892 652 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 LPLP06858 475 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 GTF2F2P13984 249 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 POLR2HP52434 150 aaKnown RBP11.59□□□□□ -0.55
HIF3A-204ENST00000300862 MRPS10P82664 201 aaKnown RBP11.59□□□□□ -0.55
HIF3A-204ENST00000300862 TFAP2EQ6VUC0 442 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 OR51A2Q8NGJ7 313 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 ARL5BQ96KC2 179 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 TXNIPQ9H3M7 391 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 TAS2R4Q9NYW5 299 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 MTFP1Q9UDX5 166 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 LRP12Q9Y561 859 aa11.59□□□□□ -0.55
HIF3A-204ENST00000300862 A0A1B0GTQ1 180 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 DCDC2BA2VCK2 349 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 A8MVM7 634 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 A8MXK9 166 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 SHISA8B8ZZ34 492 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 L7N2F9 121 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 LGALS8O00214 317 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 NUPL2O15504 423 aaKnown RBP11.58□□□□□ -0.56
HIF3A-204ENST00000300862 LMX1BO60663 402 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
HIF3A-204ENST00000300862 IFNGR1P15260 489 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 DCAF7P61962 342 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 RAB11BQ15907 218 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 OR10K2Q6IF99 312 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 OGFOD3Q6PK18 319 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 CORO6Q6QEF8 472 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 LURAP1LQ8IV03 231 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 OR51S1Q8NGJ8 323 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 OR5M1Q8NGP8 315 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 OR1J4Q8NGS1 313 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 RNF128Q8TEB7 428 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 C8orf44Q96CB5 159 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 MNTQ99583 582 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 NUDT22Q9BRQ3 303 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 DHDHQ9UQ10 334 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 EMC9Q9Y3B6 208 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 FADS1O60427 444 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 PIAS2O75928 621 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 LDOC1O95751 146 aaPredicted RBP11.58□□□□□ -0.56
HIF3A-204ENST00000300862 CD3DP04234 171 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 FBXW4P57775 412 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 NXPH1P58417 271 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 GLYATL3Q5SZD4 288 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 ZNF626Q68DY1 528 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 ALKAL2Q6UX46 152 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 STPG2Q8N412 459 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 ASB5Q8WWX0 329 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 CHST6Q9GZX3 395 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 FGF21Q9NSA1 209 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 MED9Q9NWA0 146 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 VDAC3Q9Y277 283 aa11.58□□□□□ -0.56
HIF3A-204ENST00000300862 RTTNQ86VV8 2226 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 IGKV1D-43A0A0B4J1Z2 117 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 TMEM272A0A1B0GTI8 110 aa11.57□□□□□ -0.56
HIF3A-204ENST00000300862 LOC101059948A0A1B0GTJ6 334 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms