RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 WIPI1Q5MNZ9 446 aaPredicted RBP19.02■□□□□ 0.64
SOX17-201ENST00000297316 RSBN1Q5VWQ0 802 aaPredicted RBP19.02■□□□□ 0.64
SOX17-201ENST00000297316 SLC26A10Q8NG04 563 aa19.02■□□□□ 0.64
SOX17-201ENST00000297316 OR51A4Q8NGJ6 313 aa19.02■□□□□ 0.64
SOX17-201ENST00000297316 PPP1R14AQ96A00 147 aa19.02■□□□□ 0.64
SOX17-201ENST00000297316 ZNF486Q96H40 463 aaPredicted RBP19.02■□□□□ 0.64
SOX17-201ENST00000297316 UTP23Q9BRU9 249 aaKnown RBP19.02■□□□□ 0.64
SOX17-201ENST00000297316 C11orf54Q9H0W9 315 aaPredicted RBP19.02■□□□□ 0.64
SOX17-201ENST00000297316 ADAM30Q9UKF2 790 aa19.02■□□□□ 0.64
SOX17-201ENST00000297316 CLEC4AQ9UMR7 237 aa19.02■□□□□ 0.64
SOX17-201ENST00000297316 TNFSF11O14788 317 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 PHYHO14832 338 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 CD82P27701 267 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 IFITM2Q01629 132 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 GLO1Q04760 184 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 CAMK2DQ13557 499 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 OR1C1Q15619 314 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 WDR38Q5JTN6 314 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 SLC18B1Q6NT16 456 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 LRRC28Q86X40 367 aaPredicted RBP19.01■□□□□ 0.63
SOX17-201ENST00000297316 UEVLDQ8IX04 471 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 UBE2J2Q8N2K1 259 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 CAPSLQ8WWF8 208 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 C4orf45Q96LM5 186 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 FER1L6-AS2Q96M78 137 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 UCN2Q96RP3 112 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 ABHD6Q9BV23 337 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 NEK6Q9HC98 313 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 MOV10Q9HCE1 1003 aaKnown RBP19.01■□□□□ 0.63
SOX17-201ENST00000297316 LAMA5O15230 3695 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 TRBV5-5A0A0J9YX44 114 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 TRAF3IP2O43734 574 aaPredicted RBP19.01■□□□□ 0.63
SOX17-201ENST00000297316 PNPP00491 289 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 CNR1P21554 472 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 STARP49675 285 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 ASAH1Q13510 395 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 RIN1Q13671 783 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 EIF2B1Q14232 305 aaKnown RBP19.01■□□□□ 0.63
SOX17-201ENST00000297316 IP6K3Q96PC2 410 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 PIGQQ9BRB3 760 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 FAM117AQ9C073 453 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 SPTBN2O15020 2390 aa19.01■□□□□ 0.63
SOX17-201ENST00000297316 TRABD2BA6NFA1 517 aa19■□□□□ 0.63
SOX17-201ENST00000297316 AQP7P3A6NL99 342 aa19■□□□□ 0.63
SOX17-201ENST00000297316 NPR2P20594 1047 aa19■□□□□ 0.63
SOX17-201ENST00000297316 GDF1P27539 372 aa19■□□□□ 0.63
SOX17-201ENST00000297316 BLVRAP53004 296 aa19■□□□□ 0.63
SOX17-201ENST00000297316 CARD17Q5XLA6 110 aa19■□□□□ 0.63
SOX17-201ENST00000297316 ZNF679Q8IYX0 411 aa19■□□□□ 0.63
SOX17-201ENST00000297316 GALNT16Q8N428 558 aa19■□□□□ 0.63
SOX17-201ENST00000297316 MFRPQ9BY79 579 aa19■□□□□ 0.63
SOX17-201ENST00000297316 ZNF17P17021 662 aa19■□□□□ 0.63
SOX17-201ENST00000297316 SLC35A1P78382 337 aa19■□□□□ 0.63
SOX17-201ENST00000297316 MFGE8Q08431 387 aaPredicted RBP19■□□□□ 0.63
SOX17-201ENST00000297316 Q499Y3 187 aa19■□□□□ 0.63
SOX17-201ENST00000297316 OR7E24Q6IFN5 339 aa19■□□□□ 0.63
SOX17-201ENST00000297316 LINC00346Q8IVM7 164 aa19■□□□□ 0.63
SOX17-201ENST00000297316 UBQLNLQ8IYU4 475 aa19■□□□□ 0.63
SOX17-201ENST00000297316 PHYHIPQ92561 330 aa19■□□□□ 0.63
SOX17-201ENST00000297316 ZFP64Q9NPA5 681 aa19■□□□□ 0.63
SOX17-201ENST00000297316 SLC22A13Q9Y226 551 aa19■□□□□ 0.63
SOX17-201ENST00000297316 PMS2P2O95744 297 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 HLA-DQB1P01920 261 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 CASRP41180 1078 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 RAC1P63000 192 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 ROM1Q03395 351 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 MRPL28Q13084 256 aaKnown RBP18.99■□□□□ 0.63
SOX17-201ENST00000297316 ZNF544Q6NX49 715 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 ZNF676Q8N7Q3 588 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 ADPRHL1Q8NDY3 354 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 OR2M7Q8NG81 312 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 ASB17Q8WXJ9 295 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 DCBLD2Q96PD2 775 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 MRPL13Q9BYD1 178 aaKnown RBP18.99■□□□□ 0.63
SOX17-201ENST00000297316 SRXN1Q9BYN0 137 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 BRD7Q9NPI1 651 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 NPAP1Q9NZP6 1156 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 ZNF407Q9C0G0 2248 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 FRYQ5TBA9 3013 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 LIPCP11150 499 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 PTBP1P26599 531 aaKnown RBP eCLIP18.99■□□□□ 0.63
SOX17-201ENST00000297316 H3F3AP84243 136 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 HES5Q5TA89 166 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 ESPNLQ6ZVH7 1005 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 TMPRSS7Q7RTY8 843 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 SULF2Q8IWU5 870 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 RNF128Q8TEB7 428 aa18.99■□□□□ 0.63
SOX17-201ENST00000297316 TP63Q9H3D4 680 aaPredicted RBP18.99■□□□□ 0.63
SOX17-201ENST00000297316 URB1O60287 2271 aaKnown RBP18.98■□□□□ 0.63
SOX17-201ENST00000297316 DNAJC13O75165 2243 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 CELA3AP09093 270 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 ADRA2CP18825 462 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 ENPP1P22413 925 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 FKBP2P26885 142 aaKnown RBP18.98■□□□□ 0.63
SOX17-201ENST00000297316 UTS2BQ765I0 119 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 ZNF433Q8N7K0 673 aaPredicted RBP18.98■□□□□ 0.63
SOX17-201ENST00000297316 OR6F1Q8NGZ6 308 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 OR52N5Q8NH56 324 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 OXGR1Q96P68 337 aa18.98■□□□□ 0.63
SOX17-201ENST00000297316 MMP28Q9H239 520 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms