RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 RPRD1BQ9NQG5 326 aaKnown RBP21.68■■□□□ 1.06
PDF-201ENST00000288022 DLL4Q9NR61 685 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 IL20Q9NYY1 176 aa21.68■■□□□ 1.06
PDF-201ENST00000288022 PDP1Q9P0J1 537 aaPredicted RBP21.68■■□□□ 1.06
PDF-201ENST00000288022 MED13LQ71F56 2210 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 MPZL1O95297 269 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 SNAP29O95721 258 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 IGFBP1P08833 259 aaPredicted RBP21.67■■□□□ 1.06
PDF-201ENST00000288022 GDI2P50395 445 aaKnown RBP21.67■■□□□ 1.06
PDF-201ENST00000288022 C1orf146Q5VVC0 180 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 OTPQ5XKR4 325 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 ZNF774Q6NX45 483 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 ZSCAN2Q7Z7L9 614 aaPredicted RBP21.67■■□□□ 1.06
PDF-201ENST00000288022 TMEM179BQ7Z7N9 219 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 SYT9Q86SS6 491 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 OR8D4Q8NGM9 314 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 MRPL24Q96A35 216 aaKnown RBP21.67■■□□□ 1.06
PDF-201ENST00000288022 SNX18Q96RF0 628 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 FEVQ99581 238 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 NIPSNAP1Q9BPW8 284 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 FN3KQ9H479 309 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 DYNLRB1Q9NP97 96 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 DNAJB9Q9UBS3 223 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 FZR1Q9UM11 496 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 POLR1DQ9Y2S0 133 aa21.67■■□□□ 1.06
PDF-201ENST00000288022 C5orf49A4QMS7 147 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 DCTN6O00399 190 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 BHLHE40O14503 412 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 SMAD7O15105 426 aaKnown RBP21.66■■□□□ 1.06
PDF-201ENST00000288022 LCKP06239 509 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 SCRN3Q0VDG4 424 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 CCDC121Q6ZUS5 278 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 PAPD5Q8NDF8 572 aaKnown RBP21.66■■□□□ 1.06
PDF-201ENST00000288022 ICA1LQ8NDH6 482 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 C11orf40Q8WZ69 217 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 SLCO4A1Q96BD0 722 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 SYT3Q9BQG1 590 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 WACQ9BTA9 647 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 MRPL37Q9BZE1 423 aaKnown RBP21.66■■□□□ 1.06
PDF-201ENST00000288022 ARMC1Q9NVT9 282 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 FBXO9Q9UK97 447 aaPredicted RBP21.66■■□□□ 1.06
PDF-201ENST00000288022 B9D1Q9UPM9 204 aa21.66■■□□□ 1.06
PDF-201ENST00000288022 MAP1AP78559 2803 aaPredicted RBP21.65■■□□□ 1.06
PDF-201ENST00000288022 ARRDC5A6NEK1 342 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 GPANK1O95872 356 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 INHBBP09529 407 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 RAD52P43351 418 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 PPOXP50336 477 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 EFNA4P52798 201 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 TNK1Q13470 666 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 AQP6Q13520 282 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 MSMPQ1L6U9 139 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 RGS7BPQ6MZT1 257 aaPredicted RBP21.65■■□□□ 1.06
PDF-201ENST00000288022 OR6V1Q8N148 313 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 CIARTQ8N365 385 aaPredicted RBP21.65■■□□□ 1.06
PDF-201ENST00000288022 POM121L2Q96KW2 1035 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 SORCS2Q96PQ0 1159 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 DOK1Q99704 481 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 EIF3KQ9UBQ5 218 aaKnown RBP21.65■■□□□ 1.06
PDF-201ENST00000288022 DUSP13Q9UII6 198 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 FKBP7Q9Y680 259 aa21.65■■□□□ 1.06
PDF-201ENST00000288022 LOC100509620A0A075B734 347 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 IGLV1-36A0A0B4J1U3 117 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 TMEM129A0AVI4 362 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 OR6C68A6NDL8 312 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 FAM171A2A8MVW0 826 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 DOK2O60496 412 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 TIPRLO75663 272 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 CIB2O75838 187 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 UCP2P55851 309 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 LSM6P62312 80 aaKnown RBP21.64■■□□□ 1.05
PDF-201ENST00000288022 DBPQ10586 325 aaPredicted RBP21.64■■□□□ 1.05
PDF-201ENST00000288022 COX10Q12887 443 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 OR2T33Q8NG76 320 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 TEX47Q8TBZ9 253 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 BCL2L14Q9BZR8 327 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 RACGAP1Q9H0H5 632 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 ZNF556Q9HAH1 456 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 ASH2LQ9UBL3 628 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 BAIAP2Q9UQB8 552 aa21.64■■□□□ 1.05
PDF-201ENST00000288022 H3BN98 237 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 SGCEO43556 437 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 LY6HO94772 140 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 PCSK6P29122 969 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 ARHGDIAP52565 204 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 ERVS71-1P61550 626 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 GLO1Q04760 184 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 MEP1BQ16820 701 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 CLEC2AQ6UVW9 174 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 CD300LDQ6UXZ3 194 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 HS3ST5Q8IZT8 346 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 LNX2Q8N448 690 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 CYB561A3Q8NBI2 242 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 NPEPL1Q8NDH3 523 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 COX4I2Q96KJ9 171 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 RHNO1Q9BSD3 238 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 RAB1BQ9H0U4 201 aa21.63■■□□□ 1.05
PDF-201ENST00000288022 NDRG4Q9ULP0 352 aaKnown RBP21.63■■□□□ 1.05
PDF-201ENST00000288022 A0A1W2PPW3 197 aa21.62■■□□□ 1.05
PDF-201ENST00000288022 DEAF1O75398 565 aaPredicted RBP21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms