RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 OR1S1Q8NH92 325 aa16.49■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF563Q8TA94 476 aa16.49■□□□□ 0.23
PDLIM3-201ENST00000284767 PMEPA1Q969W9 287 aa16.49■□□□□ 0.23
PDLIM3-201ENST00000284767 FXYD6Q9H0Q3 95 aa16.49■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF337Q9Y3M9 751 aa16.49■□□□□ 0.23
PDLIM3-201ENST00000284767 COL5A1P20908 1838 aaPredicted RBP16.49■□□□□ 0.23
PDLIM3-201ENST00000284767 TRBV5-5A0A0J9YX44 114 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 C2orf72A6NCS6 295 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF35P13682 527 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 ADRA2CP18825 462 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 EGR4Q05215 589 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 LTBQ06643 244 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 LINC01590Q5TEZ4 76 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 WBP2NLQ6ICG8 309 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 ANKRD37Q7Z713 158 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 ATG4DQ86TL0 474 aaPredicted RBP16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 APCDD1LQ8NCL9 501 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 OR4C16Q8NGL9 310 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 OR6N1Q8NGY5 312 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 ZPLD1Q8TCW7 415 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 PRR32B1ATL7 298 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 ADH7P40394 386 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 ALKBH1Q13686 389 aaKnown RBP16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 PEAR1Q5VY43 1037 aaPredicted RBP16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 CFAP77Q6ZQR2 320 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 PPP1R3BQ86XI6 285 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 C10orf53Q8N6V4 93 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 OR6K3Q8NGY3 331 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 NAT6Q93015 286 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 ALG12Q9BV10 488 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 TGIF2Q9GZN2 237 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 KIF26BQ2KJY2 2108 aa16.48■□□□□ 0.23
PDLIM3-201ENST00000284767 IGLV3-12A0A075B6K2 115 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 D6RAR5 112 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 LGALS8O00214 317 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 PSMD9O00233 223 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 NUDT14O95848 222 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 RPA2P15927 270 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF28P17035 718 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 TACR3P29371 465 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 RNF4P78317 190 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 DCDP81605 110 aaKnown RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF385CQ66K41 422 aaPredicted RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 SLC16A9Q7RTY1 509 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 TMPRSS12Q86WS5 348 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF227Q86WZ6 799 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF441Q8N8Z8 693 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF454Q8N9F8 522 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 GPX7Q96SL4 187 aaPredicted RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 MS4A7Q9GZW8 240 aaPredicted RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 A0A1B0GW55 424 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 BLOC1S5-TXNDC5H3BN57 136 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 GOSR2O14653 212 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 UPK3AO75631 287 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 SIX6O95475 246 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 DUX4L2P0CJ85 424 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 DUX4L3P0CJ86 424 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 DUX4L4P0CJ87 422 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 DUX4L5P0CJ88 424 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 DUX4L6P0CJ89 424 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 DUX4L7P0CJ90 424 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 GRPRP30550 384 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 PRPS1P60891 318 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 C2orf68Q2NKX9 166 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF660Q6AZW8 331 aaPredicted RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 OR7E24Q6IFN5 339 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 KRT77Q7Z794 578 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 RASD2Q96D21 266 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 KTI12Q96EK9 354 aaPredicted RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 ZC3H10Q96K80 434 aaKnown RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 EXOSC3Q9NQT5 275 aaKnown RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 DUX4Q9UBX2 424 aa16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 MRTO4Q9UKD2 239 aaKnown RBP16.47■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF432O94892 652 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 RLN1P04808 185 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 ANXA2P07355 339 aaKnown RBP16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 TMIGD3P0DMS9 266 aaPredicted RBP16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 DCAF7P61962 342 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 RPS4XP62701 263 aaKnown RBP16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 ERVK-25P63136 954 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 C1QL3Q5VWW1 255 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 ZNF440Q8IYI8 595 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 MUC20Q8N307 709 aaPredicted RBP16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 TBL1XR1Q9BZK7 514 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 STEAP1Q9UHE8 339 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 ALOX12BO75342 701 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 RPP14O95059 124 aaKnown RBP16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 CCL4P13236 92 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 AQP2P41181 271 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 SLC25A1P53007 311 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 STPG2Q8N412 459 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 FBXW5Q969U6 566 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 SLC25A32Q9H2D1 315 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 MOKQ9UQ07 419 aa16.46■□□□□ 0.23
PDLIM3-201ENST00000284767 TO15178 435 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 HPP00738 406 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 OR8G3PP0DMU2 310 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 ICAM2P13598 275 aa16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 CSRP1P21291 193 aaKnown RBP16.45■□□□□ 0.22
PDLIM3-201ENST00000284767 OC90Q02509 493 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms