RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 LIPCP11150 499 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 CD53P19397 219 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 MAPK3P27361 379 aaPredicted RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 HSD11B1P28845 292 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 MPLP40238 635 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 APOBEC1P41238 236 aaKnown RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 VEGFCP49767 419 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 DAP3P51398 398 aaKnown RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 UBE2MP61081 183 aaKnown RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ISXQ2M1V0 245 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 UBE2NLQ5JXB2 153 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 KLHL24Q6TFL4 600 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 CHMP1BQ7LBR1 199 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ZNF227Q86WZ6 799 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 WDSUB1Q8N9V3 476 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 CHST4Q8NCG5 386 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 OR5D18Q8NGL1 313 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 OR13C9Q8NGT0 318 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ZNF519Q8TB69 540 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ST8SIA1Q92185 356 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 HGDQ93099 445 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 RNF166Q96A37 237 aaPredicted RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 FGGYQ96C11 551 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 CCNL2Q96S94 520 aaPredicted RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 SOX7Q9BT81 388 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 RBM24Q9BX46 236 aaKnown RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ING3Q9NXR8 418 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 VSX1Q9NZR4 365 aaPredicted RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 MED13Q9UHV7 2174 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ZFHX4Q86UP3 3567 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 NBASA2RRP1 2371 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 IGLV3-12A0A075B6K2 115 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 LIPT2A6NK58 231 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ARPC1BO15143 372 aaKnown RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 TXNDC12O95881 172 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 CXCL3P19876 107 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ENPP1P22413 925 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 GALP22466 123 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 FOLR3P41439 243 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 PITPNAQ00169 270 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 SRYQ05066 204 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 RASGEF1BQ0VAM2 473 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 PLPPR5Q32ZL2 321 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 PCGF3Q3KNV8 242 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 SLC36A2Q495M3 483 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ZNF684Q5T5D7 378 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 C3orf33Q6P1S2 294 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 KCTD20Q7Z5Y7 419 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 ACBD4Q8NC06 268 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 SLC26A10Q8NG04 563 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 OR11G2Q8NGC1 345 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 OR52N5Q8NH56 324 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 GRPEL2Q8TAA5 225 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 POC1BQ8TC44 478 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 PCNPQ8WW12 178 aaKnown RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 GIMAP1Q8WWP7 306 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 FCAMRQ8WWV6 532 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 LIPHQ8WWY8 451 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 MS4A3Q96HJ5 214 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 MRPL39Q9NYK5 338 aaKnown RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 AKAP7Q9P0M2 348 aaPredicted RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 SEMA5BQ9P283 1151 aa5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 PCDHGA9Q9Y5G4 932 aaKnown RBP5.4□□□□□ -1.54
TNFSF4-201ENST00000281834 A0A0G2JMM0 328 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 A0A1W2PPB8 328 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 A0A1W2PRS3 328 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 KIR3DP1A8MWS1 328 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 KRT33AO76009 404 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 QDPRP09417 244 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 H2AFB2P0C5Z0 115 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 SLC6A1P30531 599 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 HOXD12P35452 270 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 MNDAP41218 407 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 GUCA1AP43080 201 aaPredicted RBP5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 DUSP3P51452 185 aaPredicted RBP5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 CLDN20P56880 219 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 PCOLCEQ15113 449 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 C9orf135Q5VTT2 229 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 ZNF385CQ66K41 422 aaPredicted RBP5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 TMEM53Q6P2H8 277 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 DNM1P34Q6PK57 102 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 TRILQ7L0X0 811 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 ABHD12BQ7Z5M8 362 aaPredicted RBP5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 NOXA1Q86UR1 476 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 MISPQ8IVT2 679 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 DND1Q8IYX4 353 aaKnown RBP5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 OR2AJ1Q8NGZ0 328 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 STK35Q8TDR2 534 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 ASB10Q8WXI3 467 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 ADAMTS14Q8WXS8 1223 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 AKAP1Q92667 903 aaKnown RBP eCLIP5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 CMBLQ96DG6 245 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 KCNJ15Q99712 375 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 SEC22CQ9BRL7 303 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 OR52A1Q9UKL2 312 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 PADI1Q9ULC6 663 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 FARSAQ9Y285 508 aaKnown RBP5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 LOXL2Q9Y4K0 774 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 MGAQ8IWI9 3026 aa5.4□□□□□ -1.55
TNFSF4-201ENST00000281834 DSPP15924 2871 aaKnown RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms