RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 GABPB1Q06547 395 aaPredicted RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 AQP6Q13520 282 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 ENDOGQ14249 297 aaKnown RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 ZSCAN26Q16670 478 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 C3orf36Q3SXR2 165 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 KLHL12Q53G59 568 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 Q5PR19 223 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 TMEM236Q5W0B7 351 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 ZNF774Q6NX45 483 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 ZNF544Q6NX49 715 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 ZFP1Q6P2D0 407 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 CORO6Q6QEF8 472 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 YTHDF3Q7Z739 585 aaKnown RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 ZNF584Q8IVC4 421 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 LINC00346Q8IVM7 164 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 OR6V1Q8N148 313 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 SVOPLQ8N434 492 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 LNX2Q8N448 690 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 SLC37A3Q8NCC5 494 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 DNAJC9Q8WXX5 260 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 C11orf40Q8WZ69 217 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 NRBF2Q96F24 287 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 CENPNQ96H22 339 aaPredicted RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 PKP2Q99959 881 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 VRK1Q99986 396 aaPredicted RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 SYT3Q9BQG1 590 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 TRAF4Q9BUZ4 470 aaPredicted RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 PRRG3Q9BZD7 231 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 OR2H1Q9GZK4 316 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 RACGAP1Q9H0H5 632 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 OR51V1Q9H2C8 321 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 PLK3Q9H4B4 646 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 RIBC2Q9H4K1 309 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 MED20Q9H944 212 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 NTN4Q9HB63 628 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 CBLN4Q9NTU7 201 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 EIF3KQ9UBQ5 218 aaKnown RBP5.66□□□□□ -1.5
CD44-204ENST00000279452 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 FZR1Q9UM11 496 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 OAZ3Q9UMX2 235 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 B9D1Q9UPM9 204 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 ORC6Q9Y5N6 252 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 FKBP7Q9Y680 259 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 PMF1-BGLAPU3KQ54 211 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 COL12A1Q99715 3063 aa5.66□□□□□ -1.5
CD44-204ENST00000279452 PCNX1Q96RV3 2341 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 ASH1LQ9NR48 2969 aaKnown RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 UTP20O75691 2785 aaKnown RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 IGLV1-36A0A0B4J1U3 117 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 PRR23D1E9PI22 279 aaPredicted RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 RER1O15258 196 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 MITFO75030 526 aaPredicted RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 ABHD16AO95870 558 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 TP53P04637 393 aaPredicted RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 HMGN1P05114 100 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 SCG5P05408 212 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 ERCC1P07992 297 aaPredicted RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 MMP7P09237 267 aaPredicted RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 DANCRP0C864 163 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 PRR23D2P0DMB1 279 aaPredicted RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 CLUP10909 449 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 SPI1P17947 270 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 NR4A1P22736 598 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 GCH1P30793 250 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 FMO3P31513 532 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 SERPINF1P36955 418 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 RPS27P42677 84 aaKnown RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 RAD52P43351 418 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 DAPP51397 102 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 NUDT6P53370 316 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 CRISP1P54107 249 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 HGFACQ04756 655 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 TAF13Q15543 124 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 SNAPC1Q16533 368 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 CARTPTQ16568 116 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 NKPD1Q17RQ9 610 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 ALKBH6Q3KRA9 238 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 SPATA46Q5T0L3 261 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 RGS7BPQ6MZT1 257 aaPredicted RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 PLBD1Q6P4A8 553 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 FAHD1Q6P587 224 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 ARL9Q6T311 187 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 LYPD4Q6UWN0 246 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 UNQ6126/PRO20091Q6UXV3 157 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 CD300LDQ6UXZ3 194 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 FOXL2NBQ6ZUU3 175 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 ERI1Q8IV48 349 aaKnown RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 PAQR4Q8N4S7 273 aaPredicted RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 NPEPL1Q8NDH3 523 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 CPEB3Q8NE35 698 aaKnown RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 NUP37Q8NFH4 326 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 OR1J1Q8NGS3 322 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 OR6N2Q8NGY6 317 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 ABHD4Q8TB40 342 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 MBD6Q96DN6 1003 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 DUS3LQ96G46 650 aaKnown RBP5.65□□□□□ -1.5
CD44-204ENST00000279452 SNX18Q96RF0 628 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 PITX2Q99697 317 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 CIB1Q99828 191 aa5.65□□□□□ -1.5
CD44-204ENST00000279452 FOXC2Q99958 501 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms