RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 HOXB3P14651 431 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 CD53P19397 219 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 IDH3GP51553 393 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ARF1P84077 181 aaKnown RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 DEFB109BQ30KR1 87 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 AADACL3Q5VUY0 350 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 OR56B2PQ8NGI1 322 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 MAFIPQ8WZ33 124 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 SULT4A1Q9BR01 284 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 SMIM3Q9BZL3 60 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 UNKLQ9H9P5 680 aaKnown RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 B3GAT1Q9P2W7 334 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 HDGFL3Q9Y3E1 203 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 CCDC163A0A0D9SF12 145 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 SLC22A23A1A5C7 686 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 FITM1A5D6W6 292 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 TRABD2BA6NFA1 517 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 CEBPZOSA8MTT3 80 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 M0R135 149 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 SUMO3P55854 103 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 TRA2AQ13595 282 aaKnown RBP eCLIP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 C1orf210Q8IVY1 113 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 NAXDQ8IW45 347 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ARL11Q969Q4 196 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ZNF799Q96GE5 643 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 NTN4Q9HB63 628 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 GALNT9Q9HCQ5 603 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ASF1BQ9NVP2 202 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 FER1L6Q2WGJ9 1857 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ANKRD61A6NGH8 418 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 OTOL1A6NHN0 477 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 OR6C65A6NJZ3 312 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 MT-CO2P00403 227 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 IFNA17P01571 189 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 TCRBP04435 133 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 GRPP07492 148 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ETV6P41212 452 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 PMPCAQ10713 525 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 IL11RAQ14626 422 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 WDR88Q6ZMY6 472 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 RNF165Q6ZSG1 346 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ABI3BPQ7Z7G0 1075 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 RDH10Q8IZV5 341 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 OR2I1PQ8NGU4 316 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 C11orf40Q8WZ69 217 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 SLC25A46Q96AG3 418 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 LRRC3BQ96PB8 259 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 CDX2Q99626 313 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 C11orf54Q9H0W9 315 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 PRMT8Q9NR22 394 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 CHST2Q9Y4C5 530 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 SBF2Q86WG5 1849 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 PCM1Q15154 2024 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 AGAP14A8MT82 685 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 E9PI62 339 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 TPT1P13693 172 aaKnown RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 S100PP25815 95 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ABCD3P28288 659 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 KIR2DL1P43626 348 aaPredicted RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 WDR5BQ86VZ2 330 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 STK35Q8TDR2 534 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ZC3HAV1LQ96H79 300 aaKnown RBP10.25□□□□□ -0.77
USP6NL-201ENST00000277575 ZNF649Q9BS31 505 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 BANF2Q9H503 90 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 NEU3Q9UQ49 428 aa10.25□□□□□ -0.77
USP6NL-201ENST00000277575 A0A087WZY1 265 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 M0QYG6 137 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 AGPAT2O15120 278 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 SULT1B1O43704 296 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 MSL3P1P0C860 447 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 PPP1CAP62136 330 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 GK2Q14410 553 aaPredicted RBP10.24□□□□□ -0.77
USP6NL-201ENST00000277575 OVCH1Q7RTY7 1134 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 SMRP1Q8NCR6 262 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 KCNE4Q8WWG9 221 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 DVL3Q92997 716 aaPredicted RBP10.24□□□□□ -0.77
USP6NL-201ENST00000277575 SEC22AQ96IW7 307 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 SIGLEC11Q96RL6 698 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 S1PR5Q9H228 398 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 FAM60AQ9NP50 221 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 A4GNTQ9UNA3 340 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 ZNF318Q5VUA4 2279 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 CACNA1IQ9P0X4 2223 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 SOD1P00441 154 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 APEHP13798 732 aaKnown RBP10.24□□□□□ -0.77
USP6NL-201ENST00000277575 EDDM3BP56851 147 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 SPEM2Q0P670 501 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 EIF3IQ13347 325 aaKnown RBP10.24□□□□□ -0.77
USP6NL-201ENST00000277575 CLVS2Q5SYC1 327 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 OTPQ5XKR4 325 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 GPR119Q8TDV5 335 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 SMAP2Q8WU79 429 aaPredicted RBP10.24□□□□□ -0.77
USP6NL-201ENST00000277575 ABHD6Q9BV23 337 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 GPATCH2Q9NW75 528 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 TAS2R4Q9NYW5 299 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 GLTPQ9NZD2 209 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 MBD1Q9UIS9 605 aaPredicted RBP10.24□□□□□ -0.77
USP6NL-201ENST00000277575 FBXO7Q9Y3I1 522 aa10.24□□□□□ -0.77
USP6NL-201ENST00000277575 R4GN57 208 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms