RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SNX33Q8WV41 574 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 TMEM239Q8WW34 195 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 CCL17Q92583 94 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 SGTBQ96EQ0 304 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 ZNF583Q96ND8 569 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 OR2H1Q9GZK4 316 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 C1orf198Q9H425 327 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 MSL2Q9HCI7 577 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 MAN2C1Q9NTJ4 1040 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 RIMS3Q9UJD0 308 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 A4GNTQ9UNA3 340 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 HIF3AQ9Y2N7 669 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 SH3GLB1Q9Y371 365 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 PPIAL4AQ9Y536 164 aa7.55□□□□□ -1.2
TPM3-201ENST00000271850 TGP01266 2768 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 IQCMA0A1B0GVH7 501 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 A0A1W2PRG6 482 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 NPIPB13A6NJU9 1138 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 A6NJY4 79 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 NPIPB4C9JG80 1138 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 MCIDASD6RGH6 385 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 F5H0A9 414 aaPredicted RBP7.54□□□□□ -1.2
TPM3-201ENST00000271850 H7C1C5 153 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 TRIM77I1YAP6 450 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 J3QLI3 93 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 IMPA2O14732 288 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 FFAR1O14842 300 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 TMPRSS2O15393 492 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 PRSS23O95084 383 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 OR5F1O95221 314 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 IGHMP01871 453 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 LSP1P33241 339 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 APLNRP35414 380 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 RBM34P42696 430 aaKnown RBP7.54□□□□□ -1.2
TPM3-201ENST00000271850 ZNF84P51523 738 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 LCN6P62502 163 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 HSF2Q03933 536 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 PSG7Q13046 419 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 TOP3AQ13472 1001 aaPredicted RBP7.54□□□□□ -1.2
TPM3-201ENST00000271850 MMEL1Q495T6 779 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 FAM27BQ5VT28 67 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 DCAF12L2Q5VW00 463 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 C8orf86Q6ZUL3 223 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 C3orf56Q8N813 242 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 OR1J2Q8NGS2 313 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 ABHD4Q8TB40 342 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 GCDHQ92947 438 aaPredicted RBP7.54□□□□□ -1.2
TPM3-201ENST00000271850 DACT3Q96B18 629 aaPredicted RBP7.54□□□□□ -1.2
TPM3-201ENST00000271850 RAB39BQ96DA2 213 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 ELMOD3Q96FG2 381 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 ATP6V1G3Q96LB4 118 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 DUX5Q96PT3 197 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 GAL3ST1Q99999 423 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 RBM4Q9BWF3 364 aaKnown RBP7.54□□□□□ -1.2
TPM3-201ENST00000271850 TXNIPQ9H3M7 391 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 C7orf69Q9H7B7 122 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 SMURF2Q9HAU4 748 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 DECR2Q9NUI1 292 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 ZNF69Q9UC07 566 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 PCDHGB1Q9Y5G3 927 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 SNX13Q9Y5W8 968 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 VWFP04275 2813 aa7.54□□□□□ -1.2
TPM3-201ENST00000271850 TRAV27A0A087WT01 109 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 J3KTA2 159 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 ANGPT2O15123 496 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 EDF1O60869 148 aaKnown RBP7.53□□□□□ -1.2
TPM3-201ENST00000271850 HIST1H2ABP04908 130 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 CST2P09228 141 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 ANPEPP15144 967 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 DAP3P51398 398 aaKnown RBP7.53□□□□□ -1.2
TPM3-201ENST00000271850 TAS2R41P59536 307 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 SELENOVP59797 346 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 PPP1CBP62140 327 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 PAX2Q02962 417 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 PLP2Q04941 152 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 CD47Q08722 323 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 DBPQ10586 325 aaPredicted RBP7.53□□□□□ -1.2
TPM3-201ENST00000271850 CDK5R2Q13319 367 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 ZMYND11Q15326 602 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 SGCAQ16586 387 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 HFEQ30201 348 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 ZNF718Q3SXZ3 478 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 PRR31Q5SQ13 230 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 CGB2Q6NT52 195 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 HIST3H2AQ7L7L0 130 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 TSEN54Q7Z6J9 526 aaKnown RBP7.53□□□□□ -1.2
TPM3-201ENST00000271850 SLC30A8Q8IWU4 369 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 MICU2Q8IYU8 434 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 ZNF283Q8N7M2 679 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 SIGLECL1Q8N7X8 197 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 NANPQ8TBE9 248 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 TSPEARQ8WU66 669 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 SLC7A6Q92536 515 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 HIST1H2ACQ93077 130 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 SUCNR1Q9BXA5 334 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 EMC7Q9NPA0 242 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 UBAP1Q9NZ09 502 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 GPR160Q9UJ42 338 aa7.53□□□□□ -1.2
TPM3-201ENST00000271850 POLR3KQ9Y2Y1 108 aaPredicted RBP7.53□□□□□ -1.2
TPM3-201ENST00000271850 NPTNQ9Y639 398 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms