RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 SRD5A2P31213 254 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 RAC1P63000 192 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 GPR176Q14439 515 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 SLC17A1Q14916 467 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 Q5BKY6 102 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 FDX2Q6P4F2 183 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 GPAT4Q86UL3 456 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 OR2G2Q8NGZ5 317 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 OR6X1Q8NH79 312 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 PSMF1Q92530 271 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 AKAP1Q92667 903 aaKnown RBP eCLIP13.67□□□□□ -0.22
SF3B4-201ENST00000271628 THRSPQ92748 146 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 ZCCHC4Q9H5U6 513 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 ANKRD10Q9NXR5 420 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 SLCO1C1Q9NYB5 712 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 KLHL13Q9P2N7 655 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 ALPK2Q86TB3 2170 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 LOC101059948A0A1B0GTJ6 334 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 G3V3Y1 287 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 PDCD5O14737 125 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 VAMP5O95183 116 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 EIF4EP06730 217 aaKnown RBP13.67□□□□□ -0.22
SF3B4-201ENST00000271628 CCR9P51686 369 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 CSNK2A1P68400 391 aaPredicted RBP13.67□□□□□ -0.22
SF3B4-201ENST00000271628 H3F3AP84243 136 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 PCK2Q16822 640 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 Q499Y3 187 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 KRT77Q7Z794 578 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 GLB1L2Q8IW92 636 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 SLC26A10Q8NG04 563 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 FOXN4Q96NZ1 517 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 EMC6Q9BV81 110 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 ABCG5Q9H222 651 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 ELOVL3Q9HB03 270 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 MCUBQ9NWR8 336 aa13.67□□□□□ -0.22
SF3B4-201ENST00000271628 A0A0G2JK05 382 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 A0A1W2PPK0 400 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 PCNX2A6NKB5 2137 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 DNASE1L1P49184 302 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 CLRN1P58418 232 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 EIF2B1Q14232 305 aaKnown RBP13.66□□□□□ -0.22
SF3B4-201ENST00000271628 PLA1AQ53H76 456 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 DEGS2Q6QHC5 323 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 LRRN1Q6UXK5 716 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 BEST3Q8N1M1 668 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 TRMT10AQ8TBZ6 339 aaKnown RBP13.66□□□□□ -0.22
SF3B4-201ENST00000271628 RNF128Q8TEB7 428 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 HSD17B8Q92506 261 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 AMELYQ99218 206 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 NAA11Q9BSU3 229 aaPredicted RBP13.66□□□□□ -0.22
SF3B4-201ENST00000271628 ABHD6Q9BV23 337 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 PARD6AQ9NPB6 346 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 NOX4Q9NPH5 578 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 ABI3Q9P2A4 366 aa13.66□□□□□ -0.22
SF3B4-201ENST00000271628 ING1Q9UK53 422 aaPredicted RBP13.66□□□□□ -0.22
SF3B4-201ENST00000271628 MRPS18CQ9Y3D5 142 aaKnown RBP13.66□□□□□ -0.22
SF3B4-201ENST00000271628 ANKRD61A6NGH8 418 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 TLX3O43711 291 aaPredicted RBP13.65□□□□□ -0.22
SF3B4-201ENST00000271628 TRAF3IP2O43734 574 aaPredicted RBP13.65□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF254O75437 659 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 DHFRP00374 187 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 RAF1P04049 648 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 NR2C1P13056 603 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 RIDAP52758 137 aaKnown RBP13.65□□□□□ -0.22
SF3B4-201ENST00000271628 OR10A3P58181 314 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 OC90Q02509 493 aaPredicted RBP13.65□□□□□ -0.22
SF3B4-201ENST00000271628 FMODQ06828 376 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 TOMM20Q15388 145 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.65□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF676Q8N7Q3 588 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 OR52N5Q8NH56 324 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 ADAMTS17Q8TE56 1095 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 KCNE4Q8WWG9 221 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 SLITRK2Q9H156 845 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 ABRACLQ9P1F3 81 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 CACNG2Q9Y698 323 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 OR4C45A6NMZ5 311 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 ZNF726A6NNF4 738 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 DNPH1O43598 174 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 LANCL1O43813 399 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 PAHP00439 452 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 PGA4P0DJD7 388 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 PGA3P0DJD8 388 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 EPXP11678 715 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 CNR1P21554 472 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 CASRP41180 1078 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 AGFG1P52594 562 aaKnown RBP13.65□□□□□ -0.22
SF3B4-201ENST00000271628 PITPNAQ00169 270 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 DCAF10Q5QP82 559 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 ABHD17BQ5VST6 288 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 LRRC69Q6ZNQ3 347 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 OR10H5Q8NGA6 315 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 GPR148Q8TDV2 347 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 HYLS1Q96M11 299 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 DERL3Q96Q80 235 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 LRFN1Q9P244 771 aa13.65□□□□□ -0.22
SF3B4-201ENST00000271628 TRBV5-5A0A0J9YX44 114 aa13.64□□□□□ -0.23
SF3B4-201ENST00000271628 ZNF780AO75290 641 aaPredicted RBP13.64□□□□□ -0.23
SF3B4-201ENST00000271628 MPZL1O95297 269 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms