RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 CELP19835 753 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 GALP22466 123 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 SERPINB10P48595 397 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 OR12D2P58182 307 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 CSNK2A1P68400 391 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 ROR2Q01974 943 aaKnown RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 LYPD4Q6UWN0 246 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 UEVLDQ8IX04 471 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 KLHL13Q9P2N7 655 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 COPS3Q9UNS2 423 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 MBD3L4A6NDZ8 208 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 MBD3L3A6NE82 208 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 MBD3L5A6NJ08 208 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 ZNF670-ZNF695F2Z2N8 137 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 J3QLW9 94 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 DVL2O14641 736 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 ZNF708P17019 499 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 ZNF19P17023 458 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 FGF9P31371 208 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 CLDN18P56856 261 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 RPS25P62851 125 aaKnown RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 TMEM225Q6GV28 225 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 CDC20BQ86Y33 519 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 ZFP41Q8N8Y5 198 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 MBD3L2Q8NHZ7 208 aaPredicted RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 TXNDC15Q96J42 360 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 KLHL15Q96M94 604 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 SLIRPQ9GZT3 109 aaKnown RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 EXOSC4Q9NPD3 245 aaKnown RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 RASD1Q9Y272 281 aa21.76■■□□□ 1.07
SSBP4-201ENST00000270061 ANKHD1Q8IWZ3 2542 aaKnown RBP21.76■■□□□ 1.07
SSBP4-201ENST00000270061 CSMD2Q7Z408 3487 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 TRDV1A0A1B0GX56 115 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 LINC01387J3KSC0 135 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 PLPP2O43688 288 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 SLC16A7O60669 478 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 GAAP10253 952 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 IGFBP2P18065 325 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 BMP5P22003 454 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 HDDC2Q7Z4H3 204 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 RFLNBQ8N5W9 214 aa21.75■■□□□ 1.07
SSBP4-201ENST00000270061 TRMT61AQ96FX7 289 aaKnown RBP21.75■■□□□ 1.07
SSBP4-201ENST00000270061 TXNL4BQ9NX01 149 aaKnown RBP21.75■■□□□ 1.07
SSBP4-201ENST00000270061 CCDC59Q9P031 241 aaKnown RBP21.75■■□□□ 1.07
SSBP4-201ENST00000270061 ZNF629Q9UEG4 869 aaPredicted RBP21.75■■□□□ 1.07
SSBP4-201ENST00000270061 CENPBD1B2RD01 187 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 ZNF814B7Z6K7 855 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 CTLA4P16410 223 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 BCL2A1Q16548 175 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 ZNF684Q5T5D7 378 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 DNM1P34Q6PK57 102 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 KCTD20Q7Z5Y7 419 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 SNX33Q8WV41 574 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 INTS14Q96SY0 518 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 NAA11Q9BSU3 229 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-201ENST00000270061 WDR76Q9H967 626 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 MED29Q9NX70 200 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 SIRT4Q9Y6E7 314 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-201ENST00000270061 TMEM14AQ9Y6G1 99 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 A3GALT2U3KPV4 340 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 PMF1-BGLAPU3KQ54 211 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 A0A0J9YW62 118 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 PNMA8CA0A1B0GUJ8 204 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 TRAF3IP2O43734 574 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-201ENST00000270061 VAMP5O95183 116 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 HLA-DPB1P04440 258 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 POU3F2P20265 443 aaPredicted RBP21.74■■□□□ 1.07
SSBP4-201ENST00000270061 AGFG1P52594 562 aaKnown RBP21.74■■□□□ 1.07
SSBP4-201ENST00000270061 ADGRE4PQ86SQ3 457 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 TMEM203Q969S6 136 aa21.74■■□□□ 1.07
SSBP4-201ENST00000270061 MRPL13Q9BYD1 178 aaKnown RBP21.74■■□□□ 1.07
SSBP4-201ENST00000270061 OGG1O15527 345 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 BIDP55957 195 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 MOGQ16653 247 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 UBQLNLQ8IYU4 475 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 ZNF295-AS1Q8N0V1 137 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 C9orf106Q8NAJ2 232 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 OR6X1Q8NH79 312 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 UCN2Q96RP3 112 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 TM9SF2Q99805 663 aa21.73■■□□□ 1.07
SSBP4-201ENST00000270061 TVP23AA6NH52 213 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 E9PI62 339 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 PHYHO14832 338 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 CD1AP06126 327 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 ZNF43P17038 809 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 GBX2P52951 348 aaPredicted RBP21.72■■□□□ 1.07
SSBP4-201ENST00000270061 FABP5Q01469 135 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 POU4F3Q15319 338 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 TRAM1Q15629 374 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 CCDC58Q4VC31 144 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 TP53I3Q53FA7 332 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 DMKNQ6E0U4 476 aaPredicted RBP21.72■■□□□ 1.07
SSBP4-201ENST00000270061 PLEKHG7Q6ZR37 379 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 CHMP1BQ7LBR1 199 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 WDFY1Q8IWB7 410 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 RELL2Q8NC24 303 aaPredicted RBP21.72■■□□□ 1.07
SSBP4-201ENST00000270061 HAVCR2Q8TDQ0 301 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 PELI1Q96FA3 418 aa21.72■■□□□ 1.07
SSBP4-201ENST00000270061 NXF2Q9GZY0 626 aaKnown RBP21.72■■□□□ 1.07
SSBP4-201ENST00000270061 RERGLQ9H628 205 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms