RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CD53P19397 219 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 TRA2AQ13595 282 aaKnown RBP eCLIP14.01□□□□□ -0.17
TIMP3-201ENST00000266085 RAB31Q13636 194 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 IL11RAQ14626 422 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF169Q14929 603 aaPredicted RBP14.01□□□□□ -0.17
TIMP3-201ENST00000266085 DOK3Q7L591 496 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 GPATCH2Q9NW75 528 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 SCGB2A1O75556 95 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 NAGAP17050 411 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 UNKLQ9H9P5 680 aaKnown RBP14.01□□□□□ -0.17
TIMP3-201ENST00000266085 SPTBP11277 2137 aa14.01□□□□□ -0.17
TIMP3-201ENST00000266085 MAGEB4O15481 346 aaPredicted RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 SUMO3P55854 103 aaPredicted RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 DEFB109BQ30KR1 87 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 CLVS2Q5SYC1 327 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 SYT9Q86SS6 491 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 LYSMD2Q8IV50 215 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF285Q96NJ3 590 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 PTTG3PQ9NZH4 202 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 MYOTQ9UBF9 498 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 PIGLQ9Y2B2 252 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 MT-CO3P00414 261 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 ABCD3P28288 659 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 HNRNPFP52597 415 aaKnown RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 PCBP4P57723 403 aaKnown RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 BDH1Q02338 343 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 GK2Q14410 553 aaPredicted RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 GPR155Q7Z3F1 870 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF610Q8N9Z0 462 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 RANGRFQ9HD47 186 aaPredicted RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 CHST2Q9Y4C5 530 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 C22orf15Q8WYQ4 148 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 ARL11Q969Q4 196 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 IER2Q9BTL4 223 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 GALNT9Q9HCQ5 603 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 E9PI62 339 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 HSPB6O14558 160 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 GREM1O60565 184 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 TPT1P13693 172 aaKnown RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 LAP3P28838 519 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 CCR9P51686 369 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 RPL23AP62750 156 aaKnown RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 PPIAP62937 165 aaKnown RBP14□□□□□ -0.17
TIMP3-201ENST00000266085 FOXF1Q12946 379 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 TPBGQ13641 420 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 PLGLAQ15195 96 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 LACC1Q8IV20 430 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 BHLHE23Q8NDY6 225 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 SEMA6DQ8NFY4 1073 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 OR11L1Q8NGX0 322 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 OXGR1Q96P68 337 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 SLC5A6Q9Y289 635 aa14□□□□□ -0.17
TIMP3-201ENST00000266085 D6RAR5 112 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 MPPED1O15442 326 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 NXPH2O95156 264 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 PTBP1P26599 531 aaKnown RBP eCLIP13.99□□□□□ -0.172e-8■■□□□ 12.7
TIMP3-201ENST00000266085 STK35Q8TDR2 534 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 SMIM19Q96E16 107 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 IL20Q9NYY1 176 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 TMEFF2Q9UIK5 374 aaPredicted RBP13.99□□□□□ -0.17
TIMP3-201ENST00000266085 HDGFL3Q9Y3E1 203 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 SLC22A23A1A5C7 686 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 STMND1H3BQB6 276 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 SIGLEC14Q08ET2 396 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 OTPQ5XKR4 325 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 ARHGDIGQ99819 225 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 SULT4A1Q9BR01 284 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 S1PR5Q9H228 398 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 MOB1AQ9H8S9 216 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 GLTPQ9NZD2 209 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 GNG12Q9UBI6 72 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 PCDHGA5Q9Y5G8 931 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 A0A087WUJ7 227 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 GPR137BO60478 399 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 CBR3O75828 277 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 SULT1C4O75897 302 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 SOD1P00441 154 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 TUBG1P23258 451 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 RRAS2P62070 204 aaPredicted RBP13.99□□□□□ -0.17
TIMP3-201ENST00000266085 PMPCAQ10713 525 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 GPR119Q8TDV5 335 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 SLC25A21Q9BQT8 299 aaPredicted RBP13.99□□□□□ -0.17
TIMP3-201ENST00000266085 RHNO1Q9BSD3 238 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 FGF20Q9NP95 211 aaPredicted RBP13.99□□□□□ -0.17
TIMP3-201ENST00000266085 P4HTMQ9NXG6 502 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 CLN3Q13286 438 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 CDK5R1Q15078 307 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 SMAP2Q8WU79 429 aaPredicted RBP13.99□□□□□ -0.17
TIMP3-201ENST00000266085 OPALINQ96PE5 141 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 OCSTAMPQ9BR26 566 aa13.99□□□□□ -0.17
TIMP3-201ENST00000266085 OR6C65A6NJZ3 312 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 LPLP06858 475 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 TBC1D28Q2M2D7 210 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 ZNF628Q5EBL2 1059 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 MRPL41Q8IXM3 137 aaKnown RBP13.98□□□□□ -0.17
TIMP3-201ENST00000266085 OR51E1Q8TCB6 317 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 SECTM1Q8WVN6 248 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 ASF1BQ9NVP2 202 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 GUSBP08236 651 aa13.98□□□□□ -0.17
TIMP3-201ENST00000266085 CASP3P42574 277 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms