RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 MAOAP21397 527 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 PSMB6P28072 239 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 CMPK1P30085 196 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 CASP6P55212 293 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 CLDN2P57739 230 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 NSUN5P2Q63ZY6 315 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 RHOUQ7L0Q8 258 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 SLC35F3Q8IY50 421 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 OR52E2Q8NGJ4 325 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 IP6K3Q96PC2 410 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 SDF2Q99470 211 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 NEU1Q99519 415 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 LGR4Q9BXB1 951 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 ATG5Q9H1Y0 275 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 GAR1Q9NY12 217 aaKnown RBP11.87□□□□□ -0.51
NUP54-201ENST00000264883 IFITM10A6NMD0 228 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 FAM157AC9JC47 383 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 MBTPS2O43462 519 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 FCGR3AP08637 254 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 DAOP14920 347 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 ST6GAL1P15907 406 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 DDTP30046 118 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 POU3F4P49335 361 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 SCAND1P57086 179 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 RAB4BP61018 213 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 COL9A2Q14055 689 aaPredicted RBP11.87□□□□□ -0.51
NUP54-201ENST00000264883 Q499Y3 187 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 SCGB2B2Q4G0G5 96 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 LYG2Q86SG7 212 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 TMEM229BQ8NBD8 167 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 OR7G2Q8NG99 324 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 RPS4Y2Q8TD47 263 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 GPX8Q8TED1 209 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 C3orf49Q96BT1 292 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 INSM2Q96T92 566 aaPredicted RBP11.87□□□□□ -0.51
NUP54-201ENST00000264883 CDCA3Q99618 268 aaPredicted RBP11.87□□□□□ -0.51
NUP54-201ENST00000264883 TGIF2Q9GZN2 237 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 PRSS16Q9NQE7 514 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 PARPBPQ9NWS1 579 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 SERTAD3Q9UJW9 196 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 CA14Q9ULX7 337 aa11.87□□□□□ -0.51
NUP54-201ENST00000264883 A0A087WV48 116 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 M0R036 132 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 MED6O75586 246 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 IFNA10P01566 189 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 LPAR6P43657 344 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 DVL1P1P54792 670 aaPredicted RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 RNF4P78317 190 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 MYO9BQ13459 2157 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 OR2L3Q8NG85 312 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 OR51D1Q8NGF3 324 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 ADAMTS17Q8TE56 1095 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 SECTM1Q8WVN6 248 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 FGF13Q92913 245 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 STACQ99469 402 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 NRTNQ99748 197 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 GPR174Q9BXC1 333 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 NRSN2Q9GZP1 204 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 DUSP22Q9NRW4 184 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 TCF20Q9UGU0 1960 aaKnown RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 A0A087X0M5 115 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 A0A1B0GX30 115 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 TCAPO15273 167 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 PCCBP05166 539 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 CRHP06850 196 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 CSRP1P21291 193 aaKnown RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 ZBTB25P24278 435 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 SNRPNP63162 240 aaKnown RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 CCINQ13939 588 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 KIAA0141Q14154 515 aaPredicted RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 MLF2Q15773 248 aaPredicted RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 EXOSC6Q5RKV6 272 aaKnown RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 ZNF585AQ6P3V2 769 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 TMEM184AQ6ZMB5 413 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 C1QL4Q86Z23 238 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 PHB2Q99623 299 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 C2orf88Q9BSF0 95 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 RGCCQ9H4X1 137 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 APOBEC3BQ9UH17 382 aaKnown RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 ADAM18Q9Y3Q7 739 aa11.86□□□□□ -0.51
NUP54-201ENST00000264883 MUC22E2RYF6 1773 aaPredicted RBP11.86□□□□□ -0.51
NUP54-201ENST00000264883 TVP23AA6NH52 213 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 ALOX12BO75342 701 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 HPGDP15428 266 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 CD1CP29017 333 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 PPICP45877 212 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 PKIAP61925 76 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 PPP1R1AQ13522 171 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 DUSP5Q16690 384 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 LBHQ53QV2 105 aaPredicted RBP11.85□□□□□ -0.51
NUP54-201ENST00000264883 SLC35D3Q5M8T2 416 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 DCST2Q5T1A1 773 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 MRPL2Q5T653 305 aaKnown RBP11.85□□□□□ -0.51
NUP54-201ENST00000264883 UNQ6494/PRO21346Q6UXR6 183 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 KCTD9Q7L273 389 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 BIVMQ86UB2 503 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 BPIFB2Q8N4F0 458 aa11.85□□□□□ -0.51
NUP54-201ENST00000264883 KDF1Q8NAX2 398 aaPredicted RBP11.85□□□□□ -0.51
NUP54-201ENST00000264883 OR56B1Q8NGI3 324 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms