RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 ELOVL3Q9HB03 270 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 Q9N2J8 555 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 HCFC2Q9Y5Z7 792 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 SCN5AQ14524 2016 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 ZNF860A6NHJ4 632 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 GRXCR1A8MXD5 290 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 RNASEK-C17orf49H0YIS7 233 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 GATCO43716 136 aaKnown RBP11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 SCGNO76038 276 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 STK17BO94768 372 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 IGKV1D-16P01601 117 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 IFNA6P05013 189 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 FAM157CP0CG43 387 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 VAMP1P23763 118 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 SRSF3P84103 164 aaKnown RBP11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 HABP2Q14520 560 aaPredicted RBP11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 NKPD1Q17RQ9 610 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 EIF2S3LQ2VIR3 472 aaKnown RBP11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 PLPP4Q5VZY2 271 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 FIGLAQ6QHK4 219 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 RNF44Q7L0R7 432 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 ZNF679Q8IYX0 411 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 PLPP7Q8NBV4 271 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 MICU1Q9BPX6 476 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 KLK13Q9UKR3 277 aa11.18□□□□□ -0.62
CHMP2B-201ENST00000263780 TRAV20A0A0B4J274 112 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 A0A0B4J2A0 478 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 C13orf42A0A1B0GVH6 325 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 A0A1W2PPC1 479 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 SCAMP1O15126 338 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 FARS2O95363 451 aaKnown RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 ABCD3P28288 659 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 AVPR2P30518 371 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 SNRPNP63162 240 aaKnown RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 OR7A5Q15622 319 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 SLC18B1Q6NT16 456 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 KCTD18Q6PI47 426 aaPredicted RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 NUP54Q7Z3B4 507 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 CD163Q86VB7 1156 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 KDF1Q8NAX2 398 aaPredicted RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 OR10R2Q8NGX6 335 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 CASTOR1Q8WTX7 329 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 WNT2BQ93097 391 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 SMIM8Q96KF7 97 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 SELENOIQ9C0D9 397 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 KCNK15Q9H427 330 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 RRAGCQ9HB90 399 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 NIT2Q9NQR4 276 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 CYTL1Q9NRR1 136 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 ASH2LQ9UBL3 628 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 SHPKQ9UHJ6 478 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 RAB22AQ9UL26 194 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 ZNF346Q9UL40 294 aaKnown RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 IGKV1D-42A0A075B6H8 117 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 MFNGO00587 321 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 EIF1BO60739 113 aaKnown RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 F12P00748 615 aaPredicted RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 CSN2P05814 226 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 ERCC1P07992 297 aaPredicted RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 DRD3P35462 400 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 EIF1P41567 113 aaKnown RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 MESP2Q0VG99 397 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 TCEA2Q15560 299 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 TEX30Q5JUR7 227 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 AGBL4Q5VU57 503 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 OR10K2Q6IF99 312 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 ZNF585AQ6P3V2 769 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 TMEM184AQ6ZMB5 413 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 NAA40Q86UY6 237 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 PAQR4Q8N4S7 273 aaPredicted RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 AQP3Q92482 292 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 CMKLR1Q99788 373 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 ZFYVE21Q9BQ24 234 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 NUDT9Q9BW91 350 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 ACKR4Q9NPB9 350 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 PRMT8Q9NR22 394 aaPredicted RBP11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 SLC22A11Q9NSA0 550 aa11.17□□□□□ -0.62
CHMP2B-201ENST00000263780 CENPFP49454 3210 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 H3BSH0 61 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 TAAR5O14804 337 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 LDLRAD4O15165 306 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 EFSO43281 561 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 SSX5O60225 188 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 CTSVO60911 334 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 MT-ND4LP03901 98 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 PET100P0DJ07 73 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 IGFBP3P17936 291 aaPredicted RBP11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 NFYBP25208 207 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 SERPINF1P36955 418 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 DNASE1L1P49184 302 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 KCNAB1Q14722 419 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 MEP1BQ16820 701 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 KLHL26Q53HC5 615 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 RHOUQ7L0Q8 258 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 NKAIN3Q8N8D7 197 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 DTWD2Q8NBA8 298 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 TMEM52Q8NDY8 209 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 CD99L2Q8TCZ2 262 aa11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 ANKRD9Q96BM1 317 aaPredicted RBP11.16□□□□□ -0.62
CHMP2B-201ENST00000263780 HRH4Q9H3N8 390 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms