RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MARCH3Q86UD3 253 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 DNAJA3Q96EY1 480 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 MVB12AQ96EY5 273 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 TSNAXQ99598 290 aaKnown RBP20.36■□□□□ 0.85
MCF2L-201ENST00000261963 MBTPS2O43462 519 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 AKR7A3O95154 331 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 PVALBP20472 110 aaPredicted RBP20.36■□□□□ 0.85
MCF2L-201ENST00000261963 UBE2MP61081 183 aaKnown RBP20.36■□□□□ 0.85
MCF2L-201ENST00000261963 ALKBH1Q13686 389 aaKnown RBP20.36■□□□□ 0.85
MCF2L-201ENST00000261963 MPPED2Q15777 294 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 VWA2Q5GFL6 755 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 TMEM88Q6PEY1 159 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 FKRPQ9H9S5 495 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 ABCA7Q8IZY2 2146 aa20.36■□□□□ 0.85
MCF2L-201ENST00000261963 A0A1B0GTH9 108 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 A0A1B0GTQ1 180 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 BGLAPP02818 100 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 RLN1P04808 185 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 TACSTD2P09758 323 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 SLC6A8P48029 635 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 CLDN12P56749 244 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 HSD11B2P80365 405 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 CBFBQ13951 182 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 RBMS2Q15434 407 aaKnown RBP20.35■□□□□ 0.85
MCF2L-201ENST00000261963 C11orf88Q6PI97 169 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 FAM220AQ7Z4H9 259 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 TMEM185AQ8NFB2 350 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 SYNPRQ8TBG9 265 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 WDR76Q9H967 626 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 IGHV1OR21-1A0A087WYE8 117 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 TSPAN2O60636 221 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 ZNF254O75437 659 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 ACHEP22303 614 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 RPS27P42677 84 aaKnown RBP20.35■□□□□ 0.85
MCF2L-201ENST00000261963 NR0B1P51843 470 aaKnown RBP20.35■□□□□ 0.85
MCF2L-201ENST00000261963 TDGQ13569 410 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 POMZP3Q6PJE2 187 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 CADM4Q8NFZ8 388 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 OR1M1Q8NGA1 313 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 CYB5R1Q9UHQ9 305 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 V9GY05 133 aa20.35■□□□□ 0.85
MCF2L-201ENST00000261963 RFPL4AA6NLU0 287 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 RFPL4AL1F8VTS6 287 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 GPANK1O95872 356 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 RAB40ALP0C0E4 278 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 FAUP35544 74 aaKnown RBP20.34■□□□□ 0.85
MCF2L-201ENST00000261963 ZNF528Q3MIS6 628 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 EEF1A1P5Q5VTE0 462 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 PRSS58Q8IYP2 241 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 SVBPQ8N300 66 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 MUC20Q8N307 709 aaPredicted RBP20.34■□□□□ 0.85
MCF2L-201ENST00000261963 TNFAIP8L1Q8WVP5 186 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 RAB40AQ8WXH6 277 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 SYT4Q9H2B2 425 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 TMEM138Q9NPI0 162 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 GPR31O00270 319 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 EIF4E2O60573 245 aaKnown RBP20.34■□□□□ 0.85
MCF2L-201ENST00000261963 FOLR1P15328 257 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 ADRA2CP18825 462 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 IGFBP4P22692 258 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 IL12BP29460 328 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 DCAF7P61962 342 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 Q499Y3 187 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 UQCC3Q6UW78 93 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 STAC2Q6ZMT1 411 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 OR6N2Q8NGY6 317 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 OR5AK2Q8NH90 309 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 C15orf40Q8WUR7 153 aa20.34■□□□□ 0.85
MCF2L-201ENST00000261963 TRBV5-5A0A0J9YX44 114 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 ALG1L2C9J202 215 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 PIAS2O75928 621 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 GP1BAP07359 652 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 ALOX5APP20292 161 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 RFC3P40938 356 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 NSDHLQ15738 373 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 MICBQ29980 383 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 DPY19L4Q7Z388 723 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 LDLRAD3Q86YD5 345 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 PUSL1Q8N0Z8 303 aaKnown RBP20.33■□□□□ 0.85
MCF2L-201ENST00000261963 ASB13Q8WXK3 278 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 PHF7Q9BWX1 381 aaPredicted RBP20.33■□□□□ 0.85
MCF2L-201ENST00000261963 WWTR1Q9GZV5 400 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 PIGMQ9H3S5 423 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 OR5V1Q9UGF6 321 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 LAMP5Q9UJQ1 280 aa20.33■□□□□ 0.85
MCF2L-201ENST00000261963 TO15178 435 aa20.33■□□□□ 0.84
MCF2L-201ENST00000261963 CDK2P24941 298 aa20.33■□□□□ 0.84
MCF2L-201ENST00000261963 CXCR1P25024 350 aa20.33■□□□□ 0.84
MCF2L-201ENST00000261963 ITPKBP27987 946 aa20.33■□□□□ 0.84
MCF2L-201ENST00000261963 CSNK1EP49674 416 aaKnown RBP20.33■□□□□ 0.84
MCF2L-201ENST00000261963 ARL4DP49703 201 aa20.33■□□□□ 0.84
MCF2L-201ENST00000261963 A0A1W2PQD3 144 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 OR4C45A6NMZ5 311 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 RENP00797 406 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 FBLP22087 321 aaKnown RBP20.32■□□□□ 0.84
MCF2L-201ENST00000261963 CSF2RBP32927 897 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 SOX2P48431 317 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 DMWDQ09019 674 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 PLCXD2Q0VAA5 305 aa20.32■□□□□ 0.84
MCF2L-201ENST00000261963 PWWP2BQ6NUJ5 590 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms