RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 VN1R2Q8NFZ6 395 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ELOA3Q8NG57 546 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 TSEN15Q8WW01 171 aaKnown RBP6.54□□□□□ -1.36
CSDE1-201ENST00000261443 MAFIPQ8WZ33 124 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 MS4A6EQ96DS6 147 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF681Q96N22 645 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 CDC6Q99741 560 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 OR52A5Q9H2C5 316 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 TAF9BQ9HBM6 251 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 PRDM7Q9NQW5 492 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 SLC17A5Q9NRA2 495 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 PARPBPQ9NWS1 579 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 MRM2Q9UI43 246 aaKnown RBP6.54□□□□□ -1.36
CSDE1-201ENST00000261443 NUP210LQ5VU65 1888 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 A0A087X0M5 115 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 A0A1B0GX30 115 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 BTBD17A6NE02 478 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 OR52A4PA6NMU1 304 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 C1QTNF3-AMACRE9PGA6 284 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 H0YIZ8 118 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 H7C1Q1 480 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 TGM5O43548 720 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 OR10H2O60403 315 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 MOSPD3O75425 235 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 GLCEO94923 617 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 OR8U9P0C7N5 309 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 HIST1H1BP16401 226 aaKnown RBP6.54□□□□□ -1.36
CSDE1-201ENST00000261443 TACR3P29371 465 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 GPR1P46091 355 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 SULT1A1P50225 295 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 EIF5AP63241 154 aaKnown RBP6.54□□□□□ -1.36
CSDE1-201ENST00000261443 MEF2DQ14814 521 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ARHGAP19Q14CB8 494 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ACTBL2Q562R1 376 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ABHD17CQ6PCB6 329 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF595Q8IYB9 648 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ADAD2Q8NCV1 583 aaKnown RBP6.54□□□□□ -1.36
CSDE1-201ENST00000261443 OR10D4PQ8NGN7 298 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 OR8U1Q8NH10 309 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 RASD2Q96D21 266 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 RBM18Q96H35 190 aaKnown RBP6.54□□□□□ -1.36
CSDE1-201ENST00000261443 PTCHD1Q96NR3 888 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ALG12Q9BV10 488 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 NMES1Q9C002 83 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 SPACA1Q9HBV2 294 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ZDHHC4Q9NPG8 344 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 FBXO34Q9NWN3 711 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 ZNF346Q9UL40 294 aaKnown RBP6.54□□□□□ -1.36
CSDE1-201ENST00000261443 KLHDC2Q9Y2U9 406 aa6.54□□□□□ -1.36
CSDE1-201ENST00000261443 PCYT1BQ9Y5K3 369 aaPredicted RBP6.54□□□□□ -1.36
CSDE1-201ENST00000261443 SCN5AQ14524 2016 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 A0A1B0GWA3 101 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 A0A1B0GWJ7 208 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 A0A1W2PPE2 198 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 A0A1W2PPV9 198 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 LOC390937A0A1W2PQ73 354 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 SLC17A2O00624 439 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 DUS4LO95620 317 aaKnown RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 ERGP11308 486 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 RPS10P46783 165 aaKnown RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 LSSP48449 732 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 CX3CR1P49238 355 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 RELQ04864 619 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 ASTLQ6HA08 431 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 Q6ZRG5 221 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 C1QL4Q86Z23 238 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 NRSN1Q8IZ57 195 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 ZDHHC22Q8N966 263 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 KDF1Q8NAX2 398 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 UBAC2Q8NBM4 344 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 OR8D1Q8WZ84 308 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 LMLNQ96KR4 655 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 RAB33BQ9H082 229 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 ADAP2Q9NPF8 381 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 KCNE5Q9UJ90 142 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 KLK13Q9UKR3 277 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 TET1Q8NFU7 2136 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 OR4C45A6NMZ5 311 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 TSTD3H0UI37 97 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 EFSO43281 561 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 STK17BO94768 372 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 PLGP00747 810 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 PMP2P02689 132 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 GALTP07902 379 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 RAB6AP20340 208 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 CCKBRP32239 447 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 BCL6P41182 706 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 SULT1A2P50226 295 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 VASPP50552 380 aaPredicted RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 CASP6P55212 293 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 EBPQ15125 230 aaKnown RBP6.53□□□□□ -1.36
CSDE1-201ENST00000261443 RSU1Q15404 277 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 GXYLT1Q4G148 440 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 ALG10BQ5I7T1 473 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 DCST2Q5T1A1 773 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 TPGS2Q68CL5 300 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 PLPP7Q8NBV4 271 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 OR5T3Q8NGG3 340 aa6.53□□□□□ -1.36
CSDE1-201ENST00000261443 DOK4Q8TEW6 326 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms