RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 USP24Q9UPU5 2620 aa15.69■□□□□ 0.1
IMP4-201ENST00000259239 LRRTM2O43300 516 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 MSR1P21757 451 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 GUCA1AP43080 201 aaPredicted RBP15.68■□□□□ 0.1
IMP4-201ENST00000259239 SIRPAP78324 504 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 LY6DQ14210 128 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 RTL6Q6ICC9 239 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 ATCAYQ86WG3 371 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 ANKRD13BQ86YJ7 626 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 PHC2Q8IXK0 858 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 ST7LQ8TDW4 575 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 UFD1Q92890 307 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 ZNF416Q9BWM5 594 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 NDUFB11Q9NX14 153 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 SLCO1C1Q9NYB5 712 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 SIRT4Q9Y6E7 314 aaPredicted RBP15.68■□□□□ 0.1
IMP4-201ENST00000259239 CD8B2A6NJW9 211 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 OR6C65A6NJZ3 312 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 FIGNL2A6NMB9 653 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 TMCC2O75069 709 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 WDR1O75083 606 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 ABHD16AO95870 558 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 KRT8P05787 483 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 GABRA1P14867 456 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 GADD45AP24522 165 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 PSMB10P40306 273 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 BDH1Q02338 343 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 EGR3Q06889 387 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 TPBGQ13641 420 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 GUSBP1Q15486 140 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 LRRN1Q6UXK5 716 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 GFRALQ6UXV0 394 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 FAM220AQ7Z4H9 259 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 LRRC18Q8N456 261 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 YIPF7Q8N8F6 280 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 OR52N5Q8NH56 324 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 ZNF420Q8TAQ5 688 aaPredicted RBP15.68■□□□□ 0.1
IMP4-201ENST00000259239 ASB17Q8WXJ9 295 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 MYCBPQ99417 103 aaPredicted RBP15.68■□□□□ 0.1
IMP4-201ENST00000259239 TMEM38BQ9NVV0 291 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 ASH2LQ9UBL3 628 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 UPB1Q9UBR1 384 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 PRSS50Q9UI38 385 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 FAM215AQ9Y5M1 114 aa15.68■□□□□ 0.1
IMP4-201ENST00000259239 SHANK1Q9Y566 2161 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 METTL15A6NJ78 407 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 ZNF587BE7ETH6 402 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 NOL3O60936 208 aaKnown RBP15.67■□□□□ 0.1
IMP4-201ENST00000259239 B4GALT1P15291 398 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 CELP19835 753 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 TMBIM6P55061 237 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 MRPS34P82930 218 aaKnown RBP15.67■□□□□ 0.1
IMP4-201ENST00000259239 SF3B4Q15427 424 aaKnown RBP eCLIP15.67■□□□□ 0.12e-7■■■■■ 27.8
IMP4-201ENST00000259239 C1orf185Q5T7R7 199 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 SEM1Q6ZVN7 128 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 FAM214BQ7L5A3 538 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 UBE2J2Q8N2K1 259 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 RPRMLQ8N4K4 120 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 RPL3LQ92901 407 aaKnown RBP15.67■□□□□ 0.1
IMP4-201ENST00000259239 C12orf43Q96C57 262 aaKnown RBP15.67■□□□□ 0.1
IMP4-201ENST00000259239 MAP6Q96JE9 813 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 OR8B4Q96RC9 309 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 TM9SF2Q99805 663 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 FOXB1Q99853 325 aa15.67■□□□□ 0.1
IMP4-201ENST00000259239 GDF2Q9UK05 429 aaPredicted RBP15.67■□□□□ 0.1
IMP4-201ENST00000259239 MBD3L4A6NDZ8 208 aaPredicted RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 MBD3L3A6NE82 208 aaPredicted RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 MBD3L5A6NJ08 208 aaPredicted RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 H3BMQ9 156 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 SULT1C4O75897 302 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 RPP14O95059 124 aaKnown RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 GABARAPO95166 117 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 CAPZA2P47755 286 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 GBX2P52951 348 aaPredicted RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 FOXG1P55316 489 aaPredicted RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 LSM3P62310 102 aaKnown RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 LSM6P62312 80 aaKnown RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 ENDOGQ14249 297 aaKnown RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 C9orf135Q5VTT2 229 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 OR2A2Q6IF42 318 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 KCTD18Q6PI47 426 aaPredicted RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 C3P1Q6ZMU1 363 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 CFAP77Q6ZQR2 320 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 KRT77Q7Z794 578 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 CNEP1R1Q8N9A8 125 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 OR2AJ1Q8NGZ0 328 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 MBD3L2Q8NHZ7 208 aaPredicted RBP15.66■□□□□ 0.1
IMP4-201ENST00000259239 RAB2BQ8WUD1 216 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 DOK1Q99704 481 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 OR51E2Q9H255 320 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 EMC9Q9Y3B6 208 aa15.66■□□□□ 0.1
IMP4-201ENST00000259239 TTLL8A6PVC2 850 aa15.65■□□□□ 0.1
IMP4-201ENST00000259239 RPL36A-HNRNPH2H7BZ11 118 aa15.65■□□□□ 0.1
IMP4-201ENST00000259239 TACSTD2P09758 323 aa15.65■□□□□ 0.1
IMP4-201ENST00000259239 PTGER4P35408 488 aa15.65■□□□□ 0.1
IMP4-201ENST00000259239 OR3A2P47893 321 aa15.65■□□□□ 0.1
IMP4-201ENST00000259239 TAS2R43P59537 309 aa15.65■□□□□ 0.1
IMP4-201ENST00000259239 RPS25P62851 125 aaKnown RBP15.65■□□□□ 0.1
IMP4-201ENST00000259239 ROM1Q03395 351 aa15.65■□□□□ 0.1
IMP4-201ENST00000259239 FAPQ12884 760 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms