RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 ZMAT1Q5H9K5 638 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 H2BFWTQ7Z2G1 175 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ANGPTL5Q86XS5 388 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 KLHDC8BQ8IXV7 354 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 INTS12Q96CB8 462 aaKnown RBP7.95□□□□□ -1.14
PTCD3-201ENST00000254630 LRFN5Q96NI6 719 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 PLA2G2FQ9BZM2 168 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 A0A1W2PNR3 127 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 UBL3O95164 117 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 CALCBP10092 127 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SLC2A1P11166 492 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 NID1P14543 1247 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 HIST1H1CP16403 213 aaKnown RBP7.95□□□□□ -1.14
PTCD3-201ENST00000254630 CPEP16870 476 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 GPX2P18283 190 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ELK1P19419 428 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 BSGP35613 385 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 CASP3P42574 277 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 GNB2P62879 340 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 FAPQ12884 760 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 PLXDC2Q6UX71 529 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 RBMS3Q6XE24 437 aaKnown RBP7.95□□□□□ -1.14
PTCD3-201ENST00000254630 KDM8Q8N371 416 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SPEM1Q8N4L4 309 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ITPKCQ96DU7 683 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 KIRREL1Q96J84 757 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 Q96M85 177 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 BANF2Q9H503 90 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ERVMER34-1Q9H9K5 563 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 KIAA1456Q9P272 454 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ANKUB1A6NFN9 424 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SIRPB1O00241 398 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ACOT8O14734 319 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 FBXO24O75426 580 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 HLA-DOBP13765 273 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ANXA7P20073 488 aaKnown RBP7.95□□□□□ -1.14
PTCD3-201ENST00000254630 DBPQ10586 325 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-201ENST00000254630 HLA-BQ31612 363 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ALKBH6Q3KRA9 238 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 EGFL6Q8IUX8 553 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ROBO4Q8WZ75 1007 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ST8SIA1Q92185 356 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SLC17A4Q9Y2C5 497 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 KLK4Q9Y5K2 254 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 CTDSP2O14595 271 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 TMPRSS11DO60235 418 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SLC2A10O95528 541 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 PIPP12273 146 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-201ENST00000254630 TMEM11P17152 192 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 TBXA2RP21731 343 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 PIGAP37287 484 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 PPICP45877 212 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 TMEM99Q8N816 258 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 FAM71CQ8NEG0 241 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SLCO5A1Q9H2Y9 848 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 BCO1Q9HAY6 547 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 ISYNA1Q9NPH2 558 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SLC22A11Q9NSA0 550 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 POMT2Q9UKY4 750 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 SLC22A20A6NK97 555 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 EGR3Q06889 387 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 DOC2BQ14184 412 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 FAM213BQ8TBF2 198 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 PHYHIPQ92561 330 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 RPL3LQ92901 407 aaKnown RBP7.95□□□□□ -1.14
PTCD3-201ENST00000254630 C1QTNF3Q9BXJ4 246 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 GPATCH2Q9NW75 528 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 PPP1R3CQ9UQK1 317 aa7.95□□□□□ -1.14
PTCD3-201ENST00000254630 THSD7AQ9UPZ6 1657 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 A0A096LPE4 126 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 LOC107986453A0A1B0GWG9 222 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 A0A1W2PPZ6 126 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 AQP7O14520 342 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 CEACAM5P06731 702 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 TEAD1P28347 426 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 NPY4RP50391 375 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 ACSM1Q08AH1 577 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 ANKRD16Q6P6B7 361 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 LACC1Q8IV20 430 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 GCNT2Q8N0V5 402 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 NUDT8Q8WV74 236 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SARAFQ96BY9 339 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 MRGPRX4Q96LA9 322 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 FAM212BQ9NTI7 297 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 A0A0A6YYD5 115 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 KLK8O60259 260 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 HBE1P02100 147 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 RPA2P15927 270 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 CCR6P51684 374 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 AGFG1P52594 562 aaKnown RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 GFERP55789 205 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 CLDN15P56746 228 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 FUNDC1Q8IVP5 155 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 GPR78Q96P69 363 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 KCNIP2Q9NS61 270 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 STMND1H3BQB6 276 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 CLN5O75503 358 aa7.94□□□□□ -1.14
PTCD3-201ENST00000254630 APEHP13798 732 aaKnown RBP7.94□□□□□ -1.14
PTCD3-201ENST00000254630 SPI1P17947 270 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms