RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 IL23AQ9NPF7 189 aa18.49■□□□□ 0.55
RARA-201ENST00000254066 PARP11Q9NR21 331 aa18.49■□□□□ 0.55
RARA-201ENST00000254066 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.48■□□□□ 0.55
RARA-201ENST00000254066 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.48■□□□□ 0.55
RARA-201ENST00000254066 LEFTY2O00292 366 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 SCGB2B2Q4G0G5 96 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 PARS2Q7L3T8 475 aaKnown RBP18.48■□□□□ 0.55
RARA-201ENST00000254066 OR2A1Q8NGT9 310 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 OR2G2Q8NGZ5 317 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 GRHL3Q8TE85 626 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 ADAD1Q96M93 576 aaKnown RBP18.48■□□□□ 0.55
RARA-201ENST00000254066 AQP10Q96PS8 301 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 WDR77Q9BQA1 342 aaPredicted RBP18.48■□□□□ 0.55
RARA-201ENST00000254066 CST11Q9H112 138 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 ZDHHC4Q9NPG8 344 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 WSB2Q9NYS7 404 aaPredicted RBP18.48■□□□□ 0.55
RARA-201ENST00000254066 FLRT3Q9NZU0 649 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 PPP4R1LQ9P1A2 415 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 ADAM18Q9Y3Q7 739 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 DNAH12Q6ZR08 3092 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 SYNDIG1LA6NDD5 238 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 TAAR5O14804 337 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 MBTPS2O43462 519 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 LDB3O75112 727 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 KLK3P07288 261 aaPredicted RBP18.48■□□□□ 0.55
RARA-201ENST00000254066 NGFRP08138 427 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 PBX2P40425 430 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 SMAD4Q13485 552 aaKnown RBP18.48■□□□□ 0.55
RARA-201ENST00000254066 METRNLQ641Q3 311 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 TCEAL8Q8IYN2 117 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 AVL9Q8NBF6 648 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 SLC41A2Q96JW4 573 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 NRTNQ99748 197 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 INSL5Q9Y5Q6 135 aa18.48■□□□□ 0.55
RARA-201ENST00000254066 IFNA17P01571 189 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 SLC2A1P11166 492 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 RPL4P36578 427 aaKnown RBP18.47■□□□□ 0.55
RARA-201ENST00000254066 ADAM8P78325 824 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 ZNF585AQ6P3V2 769 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 PAPD4Q6PIY7 484 aaKnown RBP18.47■□□□□ 0.55
RARA-201ENST00000254066 MKKSQ9NPJ1 570 aaPredicted RBP18.47■□□□□ 0.55
RARA-201ENST00000254066 C19orf53Q9UNZ5 99 aaPredicted RBP18.47■□□□□ 0.55
RARA-201ENST00000254066 SLC27A6Q9Y2P4 619 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 EEF1E1-BLOC1S5C9J1V9 151 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 PEX12O00623 359 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 SLC31A2O15432 143 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 HOXB5P09067 269 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 EDN3P14138 238 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 HOXA5P20719 270 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 SULT1A2P50226 295 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 ZSCAN4Q8NAM6 433 aaPredicted RBP18.47■□□□□ 0.55
RARA-201ENST00000254066 FBXO17Q96EF6 278 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 MRGPRX3Q96LB0 322 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 GPX7Q96SL4 187 aaPredicted RBP18.47■□□□□ 0.55
RARA-201ENST00000254066 DNAJB11Q9UBS4 358 aa18.47■□□□□ 0.55
RARA-201ENST00000254066 A0A087WV48 116 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 C5orf51A6NDU8 294 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 GPR37O15354 613 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 RHOP08100 348 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 CD37P11049 281 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 CSF2RAP15509 400 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 CD81P60033 236 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 SNRPNP63162 240 aaKnown RBP18.46■□□□□ 0.55
RARA-201ENST00000254066 EGR3Q06889 387 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 RNASE10Q5GAN6 216 aaKnown RBP18.46■□□□□ 0.55
RARA-201ENST00000254066 ALG10BQ5I7T1 473 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 C9orf152Q5JTZ5 239 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 TMEM240Q5SV17 173 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 PRSS54Q6PEW0 395 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 SSX9Q7RTT3 188 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 CDC20BQ86Y33 519 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 ZNF584Q8IVC4 421 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 COMMD1Q8N668 190 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 SYT4Q9H2B2 425 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 LMAN1LQ9HAT1 526 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 NUP210LQ5VU65 1888 aa18.46■□□□□ 0.55
RARA-201ENST00000254066 A0A1B0GVT2 93 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 TMEM72A0PK05 275 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 NUDT21O43809 227 aaKnown RBP18.45■□□□□ 0.54
RARA-201ENST00000254066 CRTAPO75718 401 aaPredicted RBP18.45■□□□□ 0.54
RARA-201ENST00000254066 CD80P33681 288 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 VASPP50552 380 aaPredicted RBP18.45■□□□□ 0.54
RARA-201ENST00000254066 TAS2R31P59538 309 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 CDRT4Q8N9R6 151 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 LYPD6BQ8NI32 183 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 NUBPLQ8TB37 319 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 MYLIPQ8WY64 445 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 ZNF587Q96SQ5 575 aaPredicted RBP18.45■□□□□ 0.54
RARA-201ENST00000254066 VN1R3Q9BXE9 311 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 C7orf77A4D0Y5 90 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 SMAD9O15198 467 aaKnown RBP18.45■□□□□ 0.54
RARA-201ENST00000254066 ITGA3P26006 1051 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 CD1CP29017 333 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 FDX2Q6P4F2 183 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 FIGNL1Q6PIW4 674 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 TMEM25Q86YD3 366 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 PTX4Q96A99 478 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 RRNAD1Q96FB5 475 aaKnown RBP18.45■□□□□ 0.54
RARA-201ENST00000254066 RAB11FIP5Q9BXF6 653 aa18.45■□□□□ 0.54
RARA-201ENST00000254066 ADAP2Q9NPF8 381 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms