RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ANK3Q12955 4377 aaKnown RBP19.7■□□□□ 0.74
LSM4-201ENST00000252816 M0R233 179 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 ACOT8O14734 319 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 MPZL1O95297 269 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 SLC6A6P31641 620 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 WNT5AP41221 380 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 PCBD1P61457 104 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 PPP1R8Q12972 351 aaKnown RBP19.7■□□□□ 0.74
LSM4-201ENST00000252816 TSPAN31Q12999 210 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 CARTPTQ16568 116 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 ZNF774Q6NX45 483 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 ZNF620Q6ZNG0 422 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 NEU4Q8WWR8 484 aaPredicted RBP19.7■□□□□ 0.74
LSM4-201ENST00000252816 NUAK2Q9H093 628 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 RERGLQ9H628 205 aa19.7■□□□□ 0.74
LSM4-201ENST00000252816 COA3Q9Y2R0 106 aaPredicted RBP19.7■□□□□ 0.74
LSM4-201ENST00000252816 SONP18583 2426 aaKnown RBP19.69■□□□□ 0.74
LSM4-201ENST00000252816 C5orf49A4QMS7 147 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 C12orf71A8MTZ7 269 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 VWC2LB2RUY7 222 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 KHDRBS3O75525 346 aaKnown RBP19.69■□□□□ 0.74
LSM4-201ENST00000252816 CLPTM1O96005 669 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 LCKP06239 509 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 ZNF250P15622 560 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 RAD52P43351 418 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 GDI2P50395 445 aaKnown RBP19.69■□□□□ 0.74
LSM4-201ENST00000252816 LOXL1Q08397 574 aaPredicted RBP19.69■□□□□ 0.74
LSM4-201ENST00000252816 ZNF770Q6IQ21 691 aaPredicted RBP19.69■□□□□ 0.74
LSM4-201ENST00000252816 SYT9Q86SS6 491 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 ZNF101Q8IZC7 436 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 TSSK2Q96PF2 358 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 TRIM15Q9C019 465 aa19.69■□□□□ 0.74
LSM4-201ENST00000252816 LOC390937A0A1W2PQ73 354 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 INAFM1C9JVW0 142 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 DCTN6O00399 190 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 ARPC3O15145 178 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 DAOP14920 347 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 DBPQ10586 325 aaPredicted RBP19.68■□□□□ 0.74
LSM4-201ENST00000252816 FAM98BQ52LJ0 330 aaKnown RBP19.68■□□□□ 0.74
LSM4-201ENST00000252816 GLB1L2Q8IW92 636 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 ALDH16A1Q8IZ83 802 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 ICA1LQ8NDH6 482 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 IFT27Q9BW83 186 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 BCL2L14Q9BZR8 327 aa19.68■□□□□ 0.74
LSM4-201ENST00000252816 MYOZ1Q9NP98 299 aaPredicted RBP19.68■□□□□ 0.74
LSM4-201ENST00000252816 IGLV3-9A0A075B6K5 115 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 A0A1W2PPW3 197 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 NDUFS8O00217 210 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 GPANK1O95872 356 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 ERCC1P07992 297 aaPredicted RBP19.67■□□□□ 0.74
LSM4-201ENST00000252816 HIST1H1CP16403 213 aaKnown RBP19.67■□□□□ 0.74
LSM4-201ENST00000252816 NR4A2P43354 598 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 ALKBH6Q3KRA9 238 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 OR2T5Q6IEZ7 315 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 OR1J1Q8NGS3 322 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 OR2T29Q8NH02 315 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 OR4K13Q8NH42 304 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 SYNPRQ8TBG9 265 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 C11orf40Q8WZ69 217 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 SLC7A6OSQ96CW6 309 aaPredicted RBP19.67■□□□□ 0.74
LSM4-201ENST00000252816 LRGUKQ96M69 825 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 NMNAT3Q96T66 252 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 PIMREGQ9BSJ6 248 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 MS4A5Q9H3V2 200 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 EGLN3Q9H6Z9 239 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 U3KQV3 271 aa19.67■□□□□ 0.74
LSM4-201ENST00000252816 CHD3Q12873 2000 aaKnown RBP19.67■□□□□ 0.74
LSM4-201ENST00000252816 CD5LO43866 347 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 CCNB2O95067 398 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 STAMBPO95630 424 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 GASTP01350 101 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 NAT2P11245 290 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 USF1P22415 310 aaPredicted RBP19.66■□□□□ 0.74
LSM4-201ENST00000252816 KLF3P57682 345 aaPredicted RBP19.66■□□□□ 0.74
LSM4-201ENST00000252816 TRAP1Q12931 704 aaKnown RBP19.66■□□□□ 0.74
LSM4-201ENST00000252816 TMEM249Q2WGJ8 235 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 LEG1Q6P5S2 330 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 PGM2L1Q6PCE3 622 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 RFPL4BQ6ZWI9 263 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 ADGRG5Q8IZF4 528 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 LINC00471Q8N535 108 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 WACQ9BTA9 647 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 TAAR3PQ9P1P4 343 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 SAMHD1Q9Y3Z3 626 aaKnown RBP19.66■□□□□ 0.74
LSM4-201ENST00000252816 CDH10Q9Y6N8 788 aa19.66■□□□□ 0.74
LSM4-201ENST00000252816 IGLV1-36A0A0B4J1U3 117 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 LYNX1G3V0Z9 82 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 GYG2O15488 501 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 TP53P04637 393 aaPredicted RBP19.65■□□□□ 0.74
LSM4-201ENST00000252816 LYNX1P0DP58 116 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 RAP2AP10114 183 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 LSM6P62312 80 aaKnown RBP19.65■□□□□ 0.74
LSM4-201ENST00000252816 SCRN3Q0VDG4 424 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 GGTLC2Q14390 218 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 DNAL1Q4LDG9 190 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 TMEM255AQ5JRV8 349 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 CLEC12AQ5QGZ9 265 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 SPATA46Q5T0L3 261 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 JAZF1Q86VZ6 243 aa19.65■□□□□ 0.74
LSM4-201ENST00000252816 OR6V1Q8N148 313 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms