RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 MFAP5Q13361 173 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 ZNF57Q68EA5 555 aaPredicted RBP16.46■□□□□ 0.23
HOXC11-201ENST00000243082 DEGS2Q6QHC5 323 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 FCRLAQ7L513 359 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 DNAAF1Q8NEP3 725 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 RNF133Q8WVZ7 376 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 TSEN15Q8WW01 171 aaKnown RBP16.46■□□□□ 0.23
HOXC11-201ENST00000243082 SLC25A38Q96DW6 304 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 TMEM9BQ9NQ34 198 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 NPAP1Q9NZP6 1156 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 OR5V1Q9UGF6 321 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 CYB5R1Q9UHQ9 305 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 CAMK2AQ9UQM7 478 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 FREM2Q5SZK8 3169 aa16.46■□□□□ 0.23
HOXC11-201ENST00000243082 ARPC4-TTLL3A0A0A6YYG9 625 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 MEIOCA2RUB1 952 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 EEF1E1O43324 174 aaKnown RBP16.45■□□□□ 0.22
HOXC11-201ENST00000243082 ZNF17P17021 662 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 EIF2B2P49770 351 aaKnown RBP16.45■□□□□ 0.22
HOXC11-201ENST00000243082 MMP15P51511 669 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 HIST3H3Q16695 136 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 CARD17Q5XLA6 110 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 ZNF544Q6NX49 715 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 SLC25A47Q6Q0C1 308 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 DHRS13Q6UX07 377 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 HDDC2Q7Z4H3 204 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 GLCCI1Q86VQ1 547 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 ZNF227Q86WZ6 799 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 ESX1Q8N693 406 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 PSMF1Q92530 271 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 THRSPQ92748 146 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 CDC6Q99741 560 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 RNF121Q9H920 327 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 G6PC2Q9NQR9 355 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 EMC9Q9Y3B6 208 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 TERTO14746 1132 aaKnown RBP16.45■□□□□ 0.22
HOXC11-201ENST00000243082 P04436 131 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 CALCBP10092 127 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 TMEM164Q5U3C3 297 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 ASPHD2Q6ICH7 369 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 ASB18Q6ZVZ8 466 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 OR10H5Q8NGA6 315 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 MRI1Q9BV20 369 aa16.45■□□□□ 0.22
HOXC11-201ENST00000243082 MRPS7Q9Y2R9 242 aaKnown RBP16.45■□□□□ 0.22
HOXC11-201ENST00000243082 TTC28Q96AY4 2481 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 H0YC42 278 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 GPR85P60893 370 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 RAC1P63000 192 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 PITPNAQ00169 270 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 EIF3IQ13347 325 aaKnown RBP16.44■□□□□ 0.22
HOXC11-201ENST00000243082 SLC36A2Q495M3 483 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 BAIAP2L2Q6UXY1 529 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 ASB5Q8WWX0 329 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 YIPF5Q969M3 257 aa16.44■□□□□ 0.22
HOXC11-201ENST00000243082 A0A1W2PPL8 197 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 ANXA2P2A6NMY6 339 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 ANXA2P07355 339 aaKnown RBP16.43■□□□□ 0.22
HOXC11-201ENST00000243082 CSRP1P21291 193 aaKnown RBP16.43■□□□□ 0.22
HOXC11-201ENST00000243082 DLSTP36957 453 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 B3GALT5-AS1P59052 145 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 GPR176Q14439 515 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 LRFN4Q6PJG9 635 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 PLET1Q6UQ28 207 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 TMPRSS12Q86WS5 348 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 IZUMO1Q8IYV9 350 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 BEST3Q8N1M1 668 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 OR10S1Q8NGN2 331 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 SLAMF6Q96DU3 332 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 ZFP3Q96NJ6 502 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 PIGQQ9BRB3 760 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 GPR87Q9BY21 358 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 ABCG5Q9H222 651 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 CENPMQ9NSP4 180 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 NLKQ9UBE8 527 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 OR52A1Q9UKL2 312 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 A0A0B4J293 547 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 A0A0J9YW62 118 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 FAM240BA0A1B0GVZ2 78 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 ZNF726A6NNF4 738 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 GALR2O43603 387 aaPredicted RBP16.43■□□□□ 0.22
HOXC11-201ENST00000243082 H2BFMP0C1H6 154 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 SRD5A2P31213 254 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 CDAP32320 146 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 CLDN17P56750 224 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 DGCR2P98153 550 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 HACD4Q5VWC8 232 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 SEC61A2Q9H9S3 476 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 DHDHQ9UQ10 334 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 PCDHGA1Q9Y5H4 931 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 LHFPL6Q9Y693 200 aa16.43■□□□□ 0.22
HOXC11-201ENST00000243082 TMEM269A0A1B0GVZ9 245 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 C21orf140B9A014 251 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 EIF1AYO14602 144 aaKnown RBP16.42■□□□□ 0.22
HOXC11-201ENST00000243082 CTDSPLO15194 276 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 EIF1BO60739 113 aaKnown RBP16.42■□□□□ 0.22
HOXC11-201ENST00000243082 QDPRP09417 244 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 CD3GP09693 182 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 SRP9P49458 86 aaKnown RBP16.42■□□□□ 0.22
HOXC11-201ENST00000243082 SPEM2Q0P670 501 aa16.42■□□□□ 0.22
HOXC11-201ENST00000243082 HES3Q5TGS1 186 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms