RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 PDP1Q9P0J1 537 aaPredicted RBP11.8□□□□□ -0.52
DDX39A-201ENST00000242776 CORINQ9Y5Q5 1042 aa11.8□□□□□ -0.52
DDX39A-201ENST00000242776 IGKV1D-42A0A075B6H8 117 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 SAC3D1A6NKF1 404 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 NPIPB7O75200 414 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 ATP6V1G2O95670 118 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 MT-ATP6P00846 226 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 IFI30P13284 250 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 HOXB1P14653 301 aaPredicted RBP11.79□□□□□ -0.52
DDX39A-201ENST00000242776 PTDSS1P48651 473 aaKnown RBP11.79□□□□□ -0.52
DDX39A-201ENST00000242776 EGR4Q05215 589 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 PRKCDQ05655 676 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 SEC23BQ15437 767 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 ACSM5Q6NUN0 579 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 SHISA2Q6UWI4 295 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 C1QL2Q7Z5L3 287 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 C10orf53Q8N6V4 93 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 DNAJC9Q8WXX5 260 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 BPIFA2Q96DR5 249 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 SGTBQ96EQ0 304 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 C9orf16Q9BUW7 83 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 OSBPL10Q9BXB5 764 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF696Q9H7X3 374 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF556Q9HAH1 456 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 MOV10Q9HCE1 1003 aaKnown RBP11.79□□□□□ -0.52
DDX39A-201ENST00000242776 DDX28Q9NUL7 540 aaKnown RBP11.79□□□□□ -0.52
DDX39A-201ENST00000242776 OAZ3Q9UMX2 235 aa11.79□□□□□ -0.52
DDX39A-201ENST00000242776 PIP5K1CO60331 668 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF432O94892 652 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 ANXA8P13928 327 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 FUT4P22083 530 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 ZFP36P26651 326 aaKnown RBP11.78□□□□□ -0.52
DDX39A-201ENST00000242776 GALK2Q01415 458 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 SLC34A1Q06495 639 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 LAPTM4AQ15012 233 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 TAF11Q15544 211 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 NKPD1Q17RQ9 610 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 GSG1Q2KHT4 349 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 DCAF12L2Q5VW00 463 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 TBPL2Q6SJ96 375 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 TREML4Q6UXN2 200 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 IL17RDQ8NFM7 739 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 OR9Q2Q8NGE9 314 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 MFSD8Q8NHS3 518 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 GNPDA2Q8TDQ7 276 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 EME1Q96AY2 570 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 KTI12Q96EK9 354 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-201ENST00000242776 EMC6Q9BV81 110 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF416Q9BWM5 594 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 ASPNQ9BXN1 380 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 GABARAPL1Q9H0R8 117 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 MEPEQ9NQ76 525 aaPredicted RBP11.78□□□□□ -0.52
DDX39A-201ENST00000242776 NANSQ9NR45 359 aa11.78□□□□□ -0.52
DDX39A-201ENST00000242776 A0A0G2JMP0 313 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 A0A0X1KG70 313 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF99A8MXY4 864 aaPredicted RBP11.77□□□□□ -0.52
DDX39A-201ENST00000242776 RPL36A-HNRNPH2H7BZ11 118 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 TPD52L2O43399 206 aaKnown RBP11.77□□□□□ -0.52
DDX39A-201ENST00000242776 RP2O75695 350 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 OR7A10O76100 309 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 CLPTM1O96005 669 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 BGLAPP02818 100 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 HIST1H2ABP04908 130 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 PATE4P0C8F1 98 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 B4GALT1P15291 398 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 GSTM3P21266 225 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 SLC9A3P48764 834 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 TMEM33P57088 247 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 CCL8P80075 99 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 ZP4Q12836 540 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF74Q16587 644 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 C1orf94Q6P1W5 598 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 PGBD2Q6P3X8 592 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF813Q6ZN06 617 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 HIST3H2AQ7L7L0 130 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 TMEM179BQ7Z7N9 219 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 SIGLECL1Q8N7X8 197 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 ATG16L2Q8NAA4 619 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 AQP11Q8NBQ7 271 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 OR4M2Q8NGB6 313 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 NANPQ8TBE9 248 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 HIST1H2ACQ93077 130 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 TAAR8Q969N4 342 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 FAM46AQ96IP4 442 aaKnown RBP11.77□□□□□ -0.52
DDX39A-201ENST00000242776 OXGR1Q96P68 337 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 TSPAN32Q96QS1 320 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 OR2M2Q96R28 347 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 CIB1Q99828 191 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 RBM4BQ9BQ04 359 aaKnown RBP11.77□□□□□ -0.52
DDX39A-201ENST00000242776 PTDSS2Q9BVG9 487 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 DGCR6LQ9BY27 220 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 NDEL1Q9GZM8 345 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 VCXQ9H320 206 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 C8orf4Q9NR00 106 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 TAAR3PQ9P1P4 343 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 B3GAT1Q9P2W7 334 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 ZNF229Q9UJW7 825 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 RCE1Q9Y256 329 aa11.77□□□□□ -0.52
DDX39A-201ENST00000242776 EFCAB9A8MZ26 197 aa11.76□□□□□ -0.53
DDX39A-201ENST00000242776 FTCDNL1E5RQL4 147 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms