RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 GSX1Q9H4S2 264 aaPredicted RBP11.79□□□□□ -0.52
MSH2-201ENST00000233146 SIRT3Q9NTG7 399 aaPredicted RBP11.79□□□□□ -0.52
MSH2-201ENST00000233146 SEMA5BQ9P283 1151 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 A0A087WWC5 75 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 TGIF2-C20orf24A0A0A6YYL0 155 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 C5orf51A6NDU8 294 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 FAM171A2A8MVW0 826 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 EIF1AYO14602 144 aaKnown RBP11.79□□□□□ -0.52
MSH2-201ENST00000233146 DFFBO76075 338 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 TGFB1P01137 390 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 EIF1AXP47813 144 aaKnown RBP11.79□□□□□ -0.52
MSH2-201ENST00000233146 TLE4Q04727 773 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 HAGHQ16775 308 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 ABLIM2Q6H8Q1 611 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 NXPE1Q8N323 547 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 RCC1LQ96I51 464 aaKnown RBP11.79□□□□□ -0.52
MSH2-201ENST00000233146 JSRP1Q96MG2 331 aaPredicted RBP11.79□□□□□ -0.52
MSH2-201ENST00000233146 OR2AG1Q9H205 316 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 MAGEH1Q9H213 219 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 BCL2L10Q9HD36 194 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 CMC2Q9NRP2 79 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 V9GYS6 101 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 MYO16Q9Y6X6 1858 aa11.79□□□□□ -0.52
MSH2-201ENST00000233146 NFKBIEO00221 500 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 CYB5BO43169 146 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 SIAH2O43255 324 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 KLK1P06870 262 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 ELFN1P0C7U0 828 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 TLX1P31314 330 aaPredicted RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 AFF3P51826 1226 aaKnown RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 SUCLG1P53597 346 aaKnown RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 MANFP55145 182 aaKnown RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 MIDNQ504T8 468 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 CBARPQ8N350 705 aaPredicted RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 KLK6Q92876 244 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 SYT3Q9BQG1 590 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 URM1Q9BTM9 101 aaKnown RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 MYOTQ9UBF9 498 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 SUSD2Q9UGT4 822 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 ZNF346Q9UL40 294 aaKnown RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 YLPM1P49750 1951 aaKnown RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 FRS3O43559 492 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 LGALS2P05162 132 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 ZNF286BP0CG31 522 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 CX3CR1P49238 355 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 ACTA2P62736 377 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 ACTG2P63267 376 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 IL13RA1P78552 427 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 CYCSP99999 105 aaKnown RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 EXOSC6Q5RKV6 272 aaKnown RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 PRSS54Q6PEW0 395 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 GRASPQ7Z6J2 395 aaPredicted RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 TMEM183AQ8IXX5 376 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 SPON2Q9BUD6 331 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 CHST11Q9NPF2 352 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 PCYT1BQ9Y5K3 369 aaPredicted RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 PUS1Q9Y606 427 aaKnown RBP eCLIP11.78□□□□□ -0.52
MSH2-201ENST00000233146 C13orf42A0A1B0GVH6 325 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 P2RX6O15547 441 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 HCRTR2O43614 444 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 KDELR3O43731 214 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 FCARP24071 287 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 GRK4P32298 578 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 GATMP50440 423 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 EFNB2P52799 333 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 TAS2R38P59533 333 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 TMEM220Q6QAJ8 160 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 KCTD9Q7L273 389 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 SLC24A4Q8NFF2 622 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 ARSGQ96EG1 525 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 ARHGDIGQ99819 225 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 GPR55Q9Y2T6 319 aaPredicted RBP11.78□□□□□ -0.52
MSH2-201ENST00000233146 ZNF281Q9Y2X9 895 aa11.78□□□□□ -0.52
MSH2-201ENST00000233146 TCRBV21S2A2A0A5A6 115 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 TAAR5O14804 337 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 THY1P04216 161 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 GALTP07902 379 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 TEAD1P28347 426 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 TACR3P29371 465 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 AKT2P31751 481 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 RPS4Y2Q8TD47 263 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 TMEM255BQ8WV15 326 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 OTUB2Q96DC9 234 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 FAAP24Q9BTP7 215 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 TCEAL2Q9H3H9 227 aaPredicted RBP11.77□□□□□ -0.52
MSH2-201ENST00000233146 OR5AC2Q9NZP5 309 aa11.77□□□□□ -0.52
MSH2-201ENST00000233146 ZNF354AO60765 605 aaPredicted RBP11.77□□□□□ -0.53
MSH2-201ENST00000233146 TK1P04183 234 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 GSTP1P09211 210 aaKnown RBP11.77□□□□□ -0.53
MSH2-201ENST00000233146 OR4A8P0C604 315 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 OR5AC1P0C628 307 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 PSMB10P40306 273 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 TSFMP43897 325 aaKnown RBP11.77□□□□□ -0.53
MSH2-201ENST00000233146 MRPL58Q14197 206 aaKnown RBP11.77□□□□□ -0.53
MSH2-201ENST00000233146 TEX38Q6PEX7 206 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 SLC35G3Q8N808 338 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 AMER3Q8N944 861 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 OR52N4Q8NGI2 321 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 GPR87Q9BY21 358 aa11.77□□□□□ -0.53
MSH2-201ENST00000233146 NEUROD4Q9HD90 331 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms