RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TMEM41BQ5BJD5 291 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 SLC37A2Q8TED4 501 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 NAT6Q93015 286 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 ARV1Q9H2C2 271 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 MICAL3Q7RTP6 2002 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 TLCD2A6NGC4 264 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 AQP7O14520 342 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 HPNP05981 417 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 SNCAP37840 140 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 PDZK1IP1Q13113 114 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 OR8B8Q15620 311 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 PRSS36Q5K4E3 855 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 GABRG1Q8N1C3 465 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 ADAM19Q9H013 955 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 LAMB1P07942 1786 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 ANKRD36CQ5JPF3 1778 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 TMEM235A6NFC5 223 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 ZNF587BE7ETH6 402 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 OR8U8P0C7N1 319 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 P2RX1P51575 399 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 RAB11AP62491 216 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 SNRPNP63162 240 aaKnown RBP12.23□□□□□ -0.45
NEK4-201ENST00000233027 TLE1Q04724 770 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 AFMIDQ63HM1 303 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 PTOV1Q86YD1 416 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 SEMA6DQ8NFY4 1073 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 AKIP1Q9NQ31 210 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 MTCH1Q9NZJ7 389 aa12.23□□□□□ -0.45
NEK4-201ENST00000233027 MT-ATP6P00846 226 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 IL34Q6ZMJ4 242 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 LGI3Q8N145 548 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 AGBL5Q8NDL9 886 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 OR52B4Q8NGK2 314 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 KCNJ15Q99712 375 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 ZNF2Q9BSG1 426 aaPredicted RBP12.22□□□□□ -0.45
NEK4-201ENST00000233027 C19orf53Q9UNZ5 99 aaPredicted RBP12.22□□□□□ -0.45
NEK4-201ENST00000233027 SDCBPO00560 298 aaPredicted RBP12.22□□□□□ -0.45
NEK4-201ENST00000233027 GUSBP08236 651 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 TRAPPC2P0DI81 140 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 TRAPPC2BP0DI82 140 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 IRS1P35568 1242 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 PYCR3Q53H96 274 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 TRIM61Q5EBN2 209 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 GJC3Q8NFK1 279 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 MUCL1Q96DR8 90 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 AIPO00170 330 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 KLK8O60259 260 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 RAF1P04049 648 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 HNF1AP20823 631 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 ACHEP22303 614 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 PSMB3P49720 205 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 THBS3P49746 956 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 CLDN20P56880 219 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 HSF1Q00613 529 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 ZNF77Q15935 545 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 GRINAQ7Z429 371 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 PRSS35Q8N3Z0 413 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 NECAP1Q8NC96 275 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 OR1M1Q8NGA1 313 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 ST8SIA4Q92187 359 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 ZNF75AQ96N20 296 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 UBL7Q96S82 380 aaPredicted RBP12.22□□□□□ -0.45
NEK4-201ENST00000233027 DUSP13Q9UII6 198 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 PHIPQ8WWQ0 1821 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 IGHV3-64DA0A0J9YX35 117 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 DCTN6O00399 190 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 ALOX12BO75342 701 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 PI3P19957 117 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 EMP3P54852 163 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 ADPRHP54922 357 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 HAGHQ16775 308 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 SLC43A2Q8N370 569 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 LHX6Q9UPM6 363 aa12.22□□□□□ -0.45
NEK4-201ENST00000233027 KIAA0141Q14154 515 aaPredicted RBP12.21□□□□□ -0.45
NEK4-201ENST00000233027 DOC2BQ14184 412 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 AGERQ15109 404 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 PARM1Q6UWI2 310 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 C17orf107Q6ZR85 190 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 H1FXQ92522 213 aaKnown RBP12.21□□□□□ -0.45
NEK4-201ENST00000233027 CSF3RQ99062 836 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 DUSP21Q9H596 190 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 DUSP22Q9NRW4 184 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 PKD1L3Q7Z443 1732 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 OR5K3A6NET4 321 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 ICAM2P13598 275 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 SDHAP31040 664 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 SLAMF6Q96DU3 332 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 GSX2Q9BZM3 304 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 PIGMQ9H3S5 423 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 B3GALT5Q9Y2C3 310 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 HRH3Q9Y5N1 445 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 TJP1Q07157 1748 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 RAB19A4D1S5 217 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 NRG2O14511 850 aaPredicted RBP12.21□□□□□ -0.45
NEK4-201ENST00000233027 THBS1P07996 1170 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 MLF1P58340 268 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 BTG2P78543 158 aa12.21□□□□□ -0.45
NEK4-201ENST00000233027 TMEM81Q6P7N7 255 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms