RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ALDOBP05062 364 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 FBLP22087 321 aaKnown RBP22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 CCKBRP32239 447 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 CAPZA1P52907 286 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 RPS15P62841 145 aaKnown RBP22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 MPPED2Q15777 294 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 CCDC157Q569K6 752 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 STPG1Q5TH74 334 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 FAM166AQ6J272 317 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 SLC36A1Q7Z2H8 476 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 BPHLQ86WA6 291 aaPredicted RBP22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 PPP1R3BQ86XI6 285 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 GCDHQ92947 438 aaPredicted RBP22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 RBP7Q96R05 134 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 SEC22CQ9BRL7 303 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 NUDT9Q9BW91 350 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 TBL1XR1Q9BZK7 514 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 ALX4Q9H161 411 aaPredicted RBP22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 ZNF107Q9UII5 783 aaPredicted RBP22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 NUP50Q9UKX7 468 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 A0A0A6YYH2 397 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 MEGF11A6BM72 1044 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 A6NJ64 397 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 HMSDA8MTL9 139 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 H7C1C5 153 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 OR2T1O43869 369 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 AKAIN1P0CW23 69 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 FGF5P12034 268 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 FSTP19883 344 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 LCN6P62502 163 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 OPCMLQ14982 345 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 CDH26Q8IXH8 852 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 TSEN15Q8WW01 171 aaKnown RBP22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 CLIP3Q96DZ5 547 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 PTDSS2Q9BVG9 487 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 APMAPQ9HDC9 416 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 COPS7AQ9UBW8 275 aa22.38■■□□□ 1.17
RUNDC3A-201ENST00000225441 OR6A2O95222 327 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 ATXN8OSP0DMR3 200 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 CRABP1P29762 137 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 IL11RAQ14626 422 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 PCGF3Q3KNV8 242 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 TOR2AQ5JU69 321 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 ARHGAP40Q5TG30 622 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 GLT8D1Q68CQ7 371 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 IDO2Q6ZQW0 420 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 MISPQ8IVT2 679 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 ZNF524Q96C55 264 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 DHRS9Q9BPW9 319 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 SLCO5A1Q9H2Y9 848 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 SCPEP1Q9HB40 452 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 CKLFQ9UBR5 152 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 KCNG2Q9UJ96 466 aa22.37■■□□□ 1.17
RUNDC3A-201ENST00000225441 IGLV1-36A0A0B4J1U3 117 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 CD2P06729 351 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 PRSS3P35030 304 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 MAP2K6P52564 334 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 ACTBP60709 375 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 ACTG1P63261 375 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 MEP1BQ16820 701 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 SLC29A4Q7RTT9 530 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 GRINAQ7Z429 371 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 KRT77Q7Z794 578 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 PIP4P1Q86T03 277 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 FAM3DQ96BQ1 224 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 SEMA4CQ9C0C4 833 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 A0A087WV48 116 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 CIB4A0PJX0 185 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 RRASP10301 218 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 NFYAP23511 347 aaPredicted RBP22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 INSM1Q01101 510 aaPredicted RBP22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 PLCXD2Q0VAA5 305 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 ACKR1Q16570 336 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 FAM209AQ5JX71 171 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 TSLPQ969D9 159 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 GAL3ST4Q96RP7 486 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 WWTR1Q9GZV5 400 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 MED9Q9NWA0 146 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 UPB1Q9UBR1 384 aa22.36■■□□□ 1.17
RUNDC3A-201ENST00000225441 TMED7-TICAM2A0A0A6YYA0 188 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 A6NIZ1 184 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 A8MUA0 341 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 SSTR2P30874 369 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 POU3F4P49335 361 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 RIDAP52758 137 aaKnown RBP22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 RAP1BP61224 184 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 RAP1AP62834 184 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 MC2RQ01718 297 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 ZNF441Q8N8Z8 693 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 SLC38A9Q8NBW4 561 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 OR4C16Q8NGL9 310 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 OR1N1Q8NGS0 311 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 OR10AC1Q8NH08 325 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 PNPLA2Q96AD5 504 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 C8orf44Q96CB5 159 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 TMED7Q9Y3B3 224 aa22.35■■□□□ 1.17
RUNDC3A-201ENST00000225441 MPDZO75970 2070 aa22.34■■□□□ 1.17
RUNDC3A-201ENST00000225441 A0A1B0GTH9 108 aa22.34■■□□□ 1.17
RUNDC3A-201ENST00000225441 L7N2F9 121 aa22.34■■□□□ 1.17
RUNDC3A-201ENST00000225441 SUSD5O60279 629 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms