RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 KCNN3Q9UGI6 736 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 SLC2A1P11166 492 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 FAM199XQ6PEV8 388 aaPredicted RBP13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 OR5M1Q8NGP8 315 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 TIMP4Q99727 224 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 FBXL2Q9UKC9 423 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 A0A087WV48 116 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 ICMTO60725 284 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 ZNF254O75437 659 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 PIAS2O75928 621 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 PDGFAP04085 211 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 ASAH2BP0C7U1 165 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 ATF4P18848 351 aaPredicted RBP13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 DPP4P27487 766 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 RPS11P62280 158 aaKnown RBP eCLIP13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 NKAIN1Q4KMZ8 207 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 PRAMEF20Q5VT98 475 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 OR6M1Q8NGM8 313 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 OR52N5Q8NH56 324 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 C8orf44Q96CB5 159 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 AMELYQ99218 206 aa13.49□□□□□ -0.25
UBE2D4-201ENST00000222402 TMEM235A6NFC5 223 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 CTDSPLO15194 276 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 IFI6P09912 130 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 P2RX3P56373 397 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 CHAF1BQ13112 559 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 COX15Q7KZN9 410 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 PNLDC1Q8NA58 520 aaKnown RBP13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 INO80EQ8NBZ0 244 aaPredicted RBP13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 THAP6Q8TBB0 222 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 SLC22A8Q8TCC7 542 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 FAM131CQ96AQ9 280 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 PHF7Q9BWX1 381 aaPredicted RBP13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 GSX2Q9BZM3 304 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 LRP12Q9Y561 859 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 COL4A3Q01955 1670 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 EEF1E1-BLOC1S5C9J1V9 151 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 RNF4P78317 190 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 FZD5Q13467 585 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 PEG10Q86TG7 708 aaKnown RBP13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 AHCTF1Q8WYP5 2266 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 ANKRD20A5PA0PJZ0 165 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 OR2AT4A6NND4 320 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 SLC17A2O00624 439 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 KLK3P07288 261 aaPredicted RBP13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 LINC00114Q6XXX2 140 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 GLDNQ6ZMI3 551 aaPredicted RBP13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 C9orf40Q8IXQ3 194 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 NAXEQ8NCW5 288 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 MR1Q95460 341 aa13.48□□□□□ -0.25
UBE2D4-201ENST00000222402 DCNP07585 359 aaKnown RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 GIPP09681 153 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 SULT1A3P0DMM9 295 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 SULT1A4P0DMN0 295 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 HSF1Q00613 529 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 EGR4Q05215 589 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 C5orf46Q6UWT4 87 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 MISPQ8IVT2 679 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 SEC22AQ96IW7 307 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 GPX7Q96SL4 187 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 TP53I11O14683 189 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 UPK3AO75631 287 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 NDUFB6O95139 128 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 TGM6O95932 706 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 HLA-AP01891 365 aaKnown RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 RAB3AP20336 220 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 CXCL12P48061 93 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 IGLV3-21P80748 117 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 RAET1LQ5VY80 246 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 ADGRE4PQ86SQ3 457 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 OR11H4Q8NGC9 324 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 OR5D14Q8NGL3 314 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 SORCS2Q96PQ0 1159 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 NMNAT2Q9BZQ4 307 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 C1orf198Q9H425 327 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 KIF26AQ9ULI4 1882 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 SDK2Q58EX2 2172 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 H7C417 338 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 ALOX12BO75342 701 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 ZFAND5O76080 213 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 GLB1P16278 677 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 BDKRB2P30411 391 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 GABRG1Q8N1C3 465 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 PGAM5Q96HS1 289 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 SPACA5Q96QH8 159 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 MTFP1Q9UDX5 166 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 KIAA1549LQ6ZVL6 1849 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 FANCMQ8IYD8 2048 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 SLC22A23A1A5C7 686 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 CTAG2O75638 210 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 ERCC1P07992 297 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 LTBRP36941 435 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 RPS4XP62701 263 aaKnown RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 TMEM176BQ3YBM2 270 aaPredicted RBP13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 BEX5Q5H9J7 111 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 STEAP2Q8NFT2 490 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 SELENOIQ9C0D9 397 aa13.47□□□□□ -0.25
UBE2D4-201ENST00000222402 LANCL2Q9NS86 450 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms