RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SRMP19623 302 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 SERPINF1P36955 418 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 RNF4P78317 190 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 HABP2Q14520 560 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-201ENST00000219334 FUNDC1Q8IVP5 155 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 PELI3Q8N2H9 469 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 OR51F2Q8NH61 342 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 KISS1RQ969F8 398 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-201ENST00000219334 TEAD3Q99594 435 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 ZNF346Q9UL40 294 aaKnown RBP17.29■□□□□ 0.36
SMPD3-201ENST00000219334 CRYM-AS1A6NIL9 109 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 PRICKLE3O43900 615 aaPredicted RBP17.29■□□□□ 0.36
SMPD3-201ENST00000219334 ADH4P08319 380 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 ANKRD16Q6P6B7 361 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 BCDIN3DQ7Z5W3 292 aaKnown RBP17.29■□□□□ 0.36
SMPD3-201ENST00000219334 OR10X1Q8NGY0 326 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 CMTM2Q8TAZ6 248 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 PSD2Q9BQI7 771 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 FRG2CA6NGY1 282 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 HSD17B6O14756 317 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 CHRNB1P11230 501 aa17.29■□□□□ 0.36
SMPD3-201ENST00000219334 NME1P15531 152 aaKnown RBP17.29■□□□□ 0.36
SMPD3-201ENST00000219334 CTXN2P0C2S0 81 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 NKX6-1P78426 367 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-201ENST00000219334 SPCS2Q15005 226 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 ZNF628Q5EBL2 1059 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 OR2A2Q6IF42 318 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 SMAP2Q8WU79 429 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-201ENST00000219334 TAS2R16Q9NYV7 291 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 R4GN57 208 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 RAB27BO00194 218 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 ZIC2O95409 532 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-201ENST00000219334 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMPD3-201ENST00000219334 C1orf210Q8IVY1 113 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 PRSS35Q8N3Z0 413 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 SLC39A9Q9NUM3 307 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 SLCO1B1Q9Y6L6 691 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 PMP2P02689 132 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 FAM157BP0CG42 384 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 LAP3P28838 519 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 OTUD1Q5VV17 481 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-201ENST00000219334 LIPNQ5VXI9 398 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 ZNF573Q86YE8 665 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 OR2A1Q8NGT9 310 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 OR51E1Q8TCB6 317 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 HRH4Q9H3N8 390 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 SLA2Q9H6Q3 261 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 TNFSF11O14788 317 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 XRCC2O43543 280 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 TATDN3Q17R31 274 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 SYT14P1Q58G82 188 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 USP51Q70EK9 711 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 LSRQ86X29 649 aaPredicted RBP17.28■□□□□ 0.36
SMPD3-201ENST00000219334 TEX37Q96LM6 180 aa17.28■□□□□ 0.36
SMPD3-201ENST00000219334 OR8U8P0C7N1 319 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 MRPL19P49406 292 aaKnown RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 SNRPGP62308 76 aaKnown RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 RPS27AP62979 156 aaKnown RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 UBA52P62987 128 aaKnown RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 H2BFWTQ7Z2G1 175 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 CATSPERDQ86XM0 798 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 LGI3Q8N145 548 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 RPL3LQ92901 407 aaKnown RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 OPALINQ96PE5 141 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 ZMAT3Q9HA38 289 aaKnown RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 CGGBP1Q9UFW8 167 aaPredicted RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 LOC107986453A0A1B0GWG9 222 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 CSF3P09919 207 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 SPRED3Q2MJR0 410 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 TFAP2EQ6VUC0 442 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 LACC1Q8IV20 430 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 ERVMER34-1Q9H9K5 563 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 A0A0D9SG52 128 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 PIPP12273 146 aaPredicted RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 GABRA4P48169 554 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 KCNIP4Q6PIL6 250 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 RFPL4BQ6ZWI9 263 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 OR2V1Q8NHB1 315 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 SPACA9Q96E40 222 aaPredicted RBP17.27■□□□□ 0.36
SMPD3-201ENST00000219334 CEPT1Q9Y6K0 416 aa17.27■□□□□ 0.36
SMPD3-201ENST00000219334 MBTPS2O43462 519 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 SBK2P0C263 348 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 NPBWR1P48145 328 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 PHLDA2Q53GA4 152 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 BATF2Q8N1L9 274 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 FAM212BQ9NTI7 297 aaPredicted RBP17.27■□□□□ 0.35
SMPD3-201ENST00000219334 GNG13Q9P2W3 67 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 TRDV1A0A1B0GX56 115 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 YIF1AO95070 293 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 HBE1P02100 147 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 BSGP35613 385 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 TLE4Q04727 773 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 PLPP5Q8NEB5 264 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 RHOXF1Q8NHV9 184 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 GATA6Q92908 595 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 ZDHHC16Q969W1 377 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 BANF2Q9H503 90 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 HDGFL3Q9Y3E1 203 aa17.27■□□□□ 0.35
SMPD3-201ENST00000219334 K7EQM0 130 aa17.26■□□□□ 0.35
SMPD3-201ENST00000219334 SOD1P00441 154 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms