RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CT45A2Q5DJT8 189 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 CT45A1Q5HYN5 189 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 COX20Q5RI15 118 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 SFRP5Q5T4F7 317 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 B3GNTL1Q67FW5 361 aaPredicted RBP4.05□□□□□ -1.76
CHD9-201ENST00000219084 ALKAL2Q6UX46 152 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 MEX3BQ6ZN04 569 aaKnown RBP4.05□□□□□ -1.76
CHD9-201ENST00000219084 SYT13Q7L8C5 426 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 GALNT16Q8N428 558 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 MRPL43Q8N983 215 aaKnown RBP4.05□□□□□ -1.76
CHD9-201ENST00000219084 OR1J1Q8NGS3 322 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 OR10Z1Q8NGY1 313 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 CT45A3Q8NHU0 189 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 FAM71F1Q96KD3 344 aaPredicted RBP4.05□□□□□ -1.76
CHD9-201ENST00000219084 ADOQ96SZ5 270 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 TEAD3Q99594 435 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 TUBB1Q9H4B7 451 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 CBY1Q9Y3M2 126 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 GSTZ1O43708 216 aaPredicted RBP4.05□□□□□ -1.76
CHD9-201ENST00000219084 ADH4P08319 380 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 LIMS3P0CW19 117 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 LIMS4P0CW20 117 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 PAX6P26367 422 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 PCSK6P29122 969 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 GZMKP49863 264 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 PMPCAQ10713 525 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 AADACL3Q5VUY0 350 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 C1orf140Q5VVS0 124 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 TANGO2Q6ICL3 276 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 GLDNQ6ZMI3 551 aaPredicted RBP4.05□□□□□ -1.76
CHD9-201ENST00000219084 FAM57BQ71RH2 274 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 TP53INP2Q8IXH6 220 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 FBXL6Q8N531 539 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 FAM213BQ8TBF2 198 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 C10orf35Q96D05 121 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 OPALINQ96PE5 141 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 SMDT1Q9H4I9 107 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.05□□□□□ -1.76
CHD9-201ENST00000219084 ZNF629Q9UEG4 869 aaPredicted RBP4.05□□□□□ -1.76
CHD9-201ENST00000219084 POLDIP2Q9Y2S7 368 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 WDR90Q96KV7 1748 aa4.05□□□□□ -1.76
CHD9-201ENST00000219084 URB1O60287 2271 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 NCR1O76036 304 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 H2AFB1P0C5Y9 115 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RPA2P15927 270 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TAS2R45P59539 299 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 FAM53BQ14153 422 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ENDOGQ14249 297 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 MED25Q71SY5 747 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ADIPOR2Q86V24 386 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 Q8IYB0 196 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 STPG2Q8N412 459 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 WDR34Q96EX3 536 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ZNF75AQ96N20 296 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 MED16Q9Y2X0 877 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RHBDD3Q9Y3P4 386 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TMED7-TICAM2A0A0A6YYA0 188 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TRBV11-1A0A0K0K1C0 115 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 A0A1B0GX78 115 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 XRCC2O43543 280 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 LDB3O75112 727 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 HOXC4P09017 264 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 ACRP10323 421 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CD38P28907 300 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RPS23P62266 143 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 VWA2Q5GFL6 755 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CISD2Q8N5K1 135 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 TMEM255BQ8WV15 326 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 MITD1Q8WV92 249 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 PP6455Q8WZ26 134 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SGIP1Q9BQI5 828 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SELENOIQ9C0D9 397 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SLIRPQ9GZT3 109 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 DNAJB11Q9UBS4 358 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 IL20RAQ9UHF4 553 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 EXOGQ9Y2C4 368 aaKnown RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 TMED7Q9Y3B3 224 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RFPL4AA6NLU0 287 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 RFPL4AL1F8VTS6 287 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 OR8U8P0C7N1 319 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 KIR2DL3P43628 341 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 MFAP5Q13361 173 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 CDK5R1Q15078 307 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TBC1D28Q2M2D7 210 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 IAH1Q2TAA2 248 aaPredicted RBP4.04□□□□□ -1.76
CHD9-201ENST00000219084 LEXMQ3ZCV2 418 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 C12orf73Q69YU5 71 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 OR7E24Q6IFN5 339 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 BTNL8Q6UX41 500 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SLC16A14Q7RTX9 510 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 KLHDC1Q8N7A1 406 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 OR4Q3Q8NH05 313 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 M1APQ8TC57 530 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 FGGYQ96C11 551 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ZIC5Q96T25 663 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 MARVELD1Q9BSK0 173 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 ZNF426Q9BUY5 554 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 SUCNR1Q9BXA5 334 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 TXNIPQ9H3M7 391 aa4.04□□□□□ -1.76
CHD9-201ENST00000219084 DLL4Q9NR61 685 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms